Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00228 ATGTCCGACAAACGAACACAGAATTCAGAGGCACGTTACCCTAGACGTGGAACAAGTTCTAGAGGCTTGTGGAATGGTTCTGCAACCCTAAACTTCACACAGAATGAAGTCCTGATTCAAGGAAGCCAATCTCCCTCAAACTCAATAGCAATGGAAAAACAAACCAGGGTGGTTGCCACAGAAAAATTTGATTTTGGAGTAAAAGAACATGTTAAGAAAAAACGATATCGTAAGCAGAATTTCAAGAAAACAACCTCTATATATCGAGGAGTGACAAGGTGTAAGGGGCGTTTCGAATCCTTTGTGTGGGATAAGGACCCTAAAACAACTGGAAAGAGAGGAAAGACAGGTGGATTTAAGAATGAACTTGAAGCCGCAAGAGCTCACGATTTGATTGCCATTAAGATATGGGGCAAGTTTGCATATACAAATTTTCCAGCCAGTGTCTATTTGAAGGAAATCCCAGAAATGCAGCAAATGAGTCTAAGAGAATACATTCTTGAGATCAGAAGGGTTAGCAAGGATACTTCAACTACTGCTACTGATGGCAGCAACCCCTCCAGTGCTGAAGCTGGAGCTTCATCTGAAGTGCAAGAAAACAATGAAGTTGGTGATGCATTGACAAACCCTGAATCCACCACAATGGAATCAATGTTAGATGAGATTGGTCAACAATCTGAAGCACCAGCAACTTTACAAAACCAACATGAGAATGTTGAAGAGAACACATTTCTGTATGATGACGAGCTTGCATGGTTAGATGTTGACCTAAGTTCCCCTGTTTGTTCCTATGATTTTGGCAGTTCACAAGTTGAGGACCACGCAAATGCTTTAGGCAATGGCCTAAATTGGGAGTCCTCAATGTTTCAAATGGGCAATGAAAATCCAGTTGGAGCAGGAAATGGAAGTGTTGCTGAATTTGGGTCAAGTTCTGTGGAGTTGCACCATTCAATGGAGCCTAATATTCAGGAATTTGAAGAACAAAACCCACATGTTGCATCTGTTCATAGGTATGAGCCTCTCCAATGTGGATTTGCCACAAACAACCATTCCCAAGATGAGAATACAGTTGTTGACTACGATTTGGATATAACCGAATATCTGAATCTCGACTCCCCTGACATGGATGATTAG 1134 0.4153 MSDKRTQNSEARYPRRGTSSRGLWNGSATLNFTQNEVLIQGSQSPSNSIAMEKQTRVVATEKFDFGVKEHVKKKRYRKQNFKKTTSIYRGVTRCKGRFESFVWDKDPKTTGKRGKTGGFKNELEAARAHDLIAIKIWGKFAYTNFPASVYLKEIPEMQQMSLREYILEIRRVSKDTSTTATDGSNPSSAEAGASSEVQENNEVGDALTNPESTTMESMLDEIGQQSEAPATLQNQHENVEENTFLYDDELAWLDVDLSSPVCSYDFGSSQVEDHANALGNGLNWESSMFQMGNENPVGAGNGSVAEFGSSSVELHHSMEPNIQEFEEQNPHVASVHRYEPLQCGFATNNHSQDENTVVDYDLDITEYLNLDSPDMDD* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00228 377 SMART rav1_2 87 152 IPR001471 GO:0003700|GO:0006355
Lapu7g00228 377 ProSiteProfiles AP2/ERF domain profile. 87 146 IPR001471 GO:0003700|GO:0006355
Lapu7g00228 377 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 53 178 - -
Lapu7g00228 377 Gene3D AP2/ERF domain 87 148 IPR036955 GO:0003700|GO:0006355
Lapu7g00228 377 SUPERFAMILY DNA-binding domain 86 148 IPR016177 GO:0003677
Lapu7g00228 377 MobiDBLite consensus disorder prediction 175 210 - -
Lapu7g00228 377 CDD AP2 86 148 IPR001471 GO:0003700|GO:0006355
Lapu7g00228 377 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00228 Lapu-Chr7 2573821 2577010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00228 58 181 AP2-EREBP Transcription Factor Family AT5G17430 42.748 7.01e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00228 K09285 - gmx:102665149 370.933