Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00226 ATGGTTCAGAACGATCGCATCAACAAGGAGACAGACTTTGAGTTTCTGCTCGACCACAACGACGACCATGCCGACCAACACCAGGACATTGAAGCTGACAAGTACCAGAGTAGCAGTGAAGGGGACACCGATGACGAGCATCATCACTCTTTCACTTCTCACCAATGGCCTCAGAGTTACAAAGAGACTACGGATTCTTACACAATAGCTGCTGCTCCAAATCTCGAGTCAGTTCTGCGAGGACCGAGTTTTATATATTCTAGTTTTGACAATCGTTCAAAGAGTAGCTTAGACATTGATGGAAAGACACCTTTTCTATCTTCTGAAGGTCTTAATCAATCAACTTGGTGGGAGAAAGCCTCAGTACAACGCCATTTTACTGAAGAATTGCCCATTGGATATGGATGCAGCTTCACTCAGACAATTTTTAACAGCATTAACGTGATGGCTGGAGTTGGCCTTCTATCTACACCATATACAGTGAATCAAGCTGGGTGGATGAGCATTGCAGTGATGCTTCTTTTTGCAGTTGTTTGTTGTTATACAGCCACTCTTATGAGACACTGCTTTGAAAGCAGAGAAGGAATCGTCACCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTGTTGTATCGATCATTTTGTACGTTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAATCTCAGTAGTCTGTTTCCTGGTACTTCCTTAAGTATGGGTAGTTTGCAGTTAGACACTATGCACCTGTTTGGAGTTTTGACAGCCCTTATTATTCTTCCAACTGTTTGGTTGAAGGATCTTCGCTTAATCTCTTACCTATCAGCTGGAGGGGTTGTTACAACACTTGTGATTATTATCTGTGTGTTTTGTGTTGGGACCACAGAGGGTGTTGGATTCCATCAAACTGGTCAATTAGTAAAATGGAATGGCATTCCATTTGCTGTTGGTGTCTATGGATTCTGCTTTGCTGGACATTCGGTTTTCCCAAATATTTATCAGTCTATGGCTGACAAGAAACAATTTACCAAAGCCCTTATAACATGTTTCTGTTTGTGTGTTTTGATATATGGAAGCGTTGCAATCATGGGATTTCTCATGTTTGGTGATAGCACTTTGTCTCAGATAACATTGAATATGCCACCGGGTGCTATTGCTTCCAAAGTTGCATTGTGGACGACGGTTGTTAACCCATTCACTAAATATGCTTTGTTGATGAACCCACTGGCAAGGAGTTTAGAGGAGTTGCTGCCAGAGAGAATTTCAACTACATATTGGTGTTTCATTCTTCTTAGAACAGCACTTGTTGCATCTACAGTTTGTGTTGCCTTTCTGGTTCCCTTTTTTGGGCTTGTGATGGCTTTAATTGGTTCTCTCTTTAGTATACTTGTGTCAGCGATAATGCCAACTTTATGTTTCCTGAAAATTATTGGGAAAAAAGCTACAAAGATACAGGTTGCACTAAGTGTCGCAATTGCTGTATTGGGAATCATTTGTGCACTCCTTGGAACATATTCCTCTGTGTTGAGTATTGCAGACAGTTACTGA 1575 0.4114 MVQNDRINKETDFEFLLDHNDDHADQHQDIEADKYQSSSEGDTDDEHHHSFTSHQWPQSYKETTDSYTIAAAPNLESVLRGPSFIYSSFDNRSKSSLDIDGKTPFLSSEGLNQSTWWEKASVQRHFTEELPIGYGCSFTQTIFNSINVMAGVGLLSTPYTVNQAGWMSIAVMLLFAVVCCYTATLMRHCFESREGIVTYPDIGEAAFGRYGRIVVSIILYVELYSYCVEFITLEGDNLSSLFPGTSLSMGSLQLDTMHLFGVLTALIILPTVWLKDLRLISYLSAGGVVTTLVIIICVFCVGTTEGVGFHQTGQLVKWNGIPFAVGVYGFCFAGHSVFPNIYQSMADKKQFTKALITCFCLCVLIYGSVAIMGFLMFGDSTLSQITLNMPPGAIASKVALWTTVVNPFTKYALLMNPLARSLEELLPERISTTYWCFILLRTALVASTVCVAFLVPFFGLVMALIGSLFSILVSAIMPTLCFLKIIGKKATKIQVALSVAIAVLGIICALLGTYSSVLSIADSY* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00226 524 Gene3D Amino acid/polyamine transporter I 135 522 - -
Lapu7g00226 524 MobiDBLite consensus disorder prediction 33 57 - -
Lapu7g00226 524 Pfam Transmembrane amino acid transporter protein 137 516 IPR013057 -
Lapu7g00226 524 MobiDBLite consensus disorder prediction 33 52 - -
Lapu7g00226 524 FunFam Amino acid transporter AVT1A 134 523 - -
Lapu7g00226 524 PANTHER OS05G0424000 PROTEIN-RELATED 141 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00226 Lapu-Chr7 2550019 2557506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00226 3 459 Amino Acid or Auxin Permease AAAP Family AT2G41190 62.004 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00226 K15015 - gmx:100790344 874.389