Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00214 ATGGCTTCTTCAAGTGTTAAGAGCACCAACTCAACAACTCAACTTGAACCACTCCCACCACATCTTCATCATCAACAACCACCACATCATTTTCATCATCATCAAATACCAGACCAACAAATCTCTTTTGGGATGTTGCCATCGTCCTCATCACCCTCTATTCCTGCAAATTACTTAAGTAAAGATTCTGGAGCTTATGATTTGGGGGAATTGGATCAAGCCTTCTTTTTATATCTTGATGGTCAAGCTGACCCTTCTAGTGTTCAAGACCAAAGACGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCACGCAGTGCCACCATCTAATTCCAAGGTTAACATGGAATTACCCTCCACACAAACCAGTGGCTCCAAGAGACTACCAGGGTCATCCATAGCCAAGTCCAACCCTCACACTGAAGCTCCCTCTGTACCTGAACCACCCAAAGCTATAAAGCGAGAGGGAAATCGCAAGGGAACAACCTCAAGTTCTGAGCAGGAAGCACCCAAAACACCAGATCCTAAGACATTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGAAAAAGCAGGCTGAGGAAAAAGGCGTACGTTCAGCAGCTAGAGTCAAGTAGGATTAAGCTTAATCAGCTAGAACAAGAGTTACAGCGTGCAAGAGCTCAAGGCATATTAATGGGTGGAAATGCCCTTATGGGAGGTGAGCAAGGCTTTCCTATGGCTATGAGTGGCATTAGCTCAGAGGCTGCAATGTTTGACGTGGAATATGCAAGATGGTTAGAGGAGCACCAACGCATAGTGTGCGAGCTAAGAGGTGCAGTGCAAGAACACCTCCATGAAAACGAGCTTAGGTTATATGTGGATAATTGTTTGGCTCACTACGACCAAGTAATGAACCTGAAGAGCATAGTAGCCAAAACAGATGTATTCCACCTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGTTTCATGTGGATCGGTGGTTTCAGACCCTCTGAACTCATCAAGATTATTCTGGGTCAAATTGAGCCTCTTACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCACAAGGACTTGATGCCCTAAACCAATCTCTCTCAGACACCATAACATCAGACTCTTTGTGGTGTCCTCCAAATATGACCAACTACATGGGACAGATGGCTGTGGCAATGAACAAACTCTCCACTCTTGAAAGTTTTGCAAGACAGGCTGATAATCTGAGGCACCAAACCATTCATCGTCTGCACCAACTTCTAACCACACGACAAGCCGCAAGGTGTTTGGTGGCCATTTCTGAGTACTTCCATCGTCTTCAAGCCCTCAGTTCTCTGTGGTTCACACGCCCTCGTCAAGACTAG 1419 0.4567 MASSSVKSTNSTTQLEPLPPHLHHQQPPHHFHHHQIPDQQISFGMLPSSSSPSIPANYLSKDSGAYDLGELDQAFFLYLDGQADPSSVQDQRRMRPPPTLNIFPSQPMHAVPPSNSKVNMELPSTQTSGSKRLPGSSIAKSNPHTEAPSVPEPPKAIKREGNRKGTTSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGILMGGNALMGGEQGFPMAMSGISSEAAMFDVEYARWLEEHQRIVCELRGAVQEHLHENELRLYVDNCLAHYDQVMNLKSIVAKTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSDTITSDSLWCPPNMTNYMGQMAVAMNKLSTLESFARQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLQALSSLWFTRPRQD* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00214 472 Pfam Seed dormancy control 272 345 IPR025422 GO:0006351|GO:0043565
Lapu7g00214 472 PANTHER TRANSCRIPTION FACTOR TGA9 100 471 - -
Lapu7g00214 472 MobiDBLite consensus disorder prediction 1 34 - -
Lapu7g00214 472 ProSiteProfiles DOG1 domain profile. 254 468 IPR025422 GO:0006351|GO:0043565
Lapu7g00214 472 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 223 IPR004827 GO:0003700|GO:0006355
Lapu7g00214 472 MobiDBLite consensus disorder prediction 1 19 - -
Lapu7g00214 472 Pfam bZIP transcription factor 181 219 IPR004827 GO:0003700|GO:0006355
Lapu7g00214 472 SUPERFAMILY Leucine zipper domain 181 223 IPR046347 GO:0003700|GO:0006355
Lapu7g00214 472 CDD bZIP_HBP1b-like 181 233 - -
Lapu7g00214 472 MobiDBLite consensus disorder prediction 85 184 - -
Lapu7g00214 472 Gene3D - 180 230 - -
Lapu7g00214 472 Coils Coil 200 227 - -
Lapu7g00214 472 FunFam BZIP family transcription factor 180 229 - -
Lapu7g00214 472 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Lapu7g00214 472 SMART brlzneu 177 243 IPR004827 GO:0003700|GO:0006355
Lapu7g00214 472 MobiDBLite consensus disorder prediction 108 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00214 Lapu-Chr7 2406236 2414039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00214 56 472 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.801 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu7g00214 DOG1 2.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00214 K14431 - gmx:100800059 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00110 1 5995661 6001813 Lapu7g00214 7 2406236 2414039 PCT