Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00209 ATGAGTTCTGGTTCAGTCACCAAAGCACCACCCTCTTCCTCCTCATCACCCAACTCTTCCACTGAGTCGCTTGATGGCTTGAAGTTTGGCCAGAAAATCTACTTTGAGGATGTGAGTGTTGCAGCTGCAGCAACAACTCAAGGGGCCAAAACAAGTGGTGGGATTTCTTCTTCTTCCTCTTCTTCAAAGAAGGGAAGGGGTGGCTCAGTGCAACCAGCTCACCCTCCTAGATGTCAGGTTGAGGGCTGCAAAGTAGATCTGAGTGGAGCTAAGGCTTACTATTCTAGGCACAAGGTTTGTGCCATGCACTCCAAGTCCCCAACTGTCATTGTGGCTGGTCTGGAACAAAGGTTTTGCCAACAGTGTAGCAGGTTTCATCTGCTTTCTGAATTTGATCAAGGAAAACGAAGCTGCCGCAGGCGACTTGCTGGCCATAATGAGCGCCGGCGAAAGCCTCCACCCAGTTCCATATTAACCTCTCGCTATGGCAGGCTTTCTTCTCCTATTTTTGCAGATAACAATGGGAGAGCTGGTGGCTTTCTCATGGAATTTGCTTCATATCCGAAGCTCACACTGAGAAACACCTTGCCAACTCCAAGATCAGCCGAGCCATCACCCGGAAACCATGCTGCAACACTAACCTGGCAGGCCAGCTCAGACACAGCAGCTGAATTTTTCCTGCAAGGATCAGGGAGTGGTGGTGGAACAGGCCTCCTTGGTTCCAAACATCCTTTAGTGGAAAGCTACGCCGGAGTCACTGACTCAAACTGTGCTCTCTCTCTTCTGTCAAGTCAAACATGGGGTTCCAGAATCACACAACCAAGTGTTGAGCTGAACAACAACTTGTTGAATTTCAATGGAACATCCATGACACAATTCACTGCTGCTTCCTCACCAGTTGCAGCCATCCATCAACTTCCAAATGCCACCTCATGGTACCTGAAGGGCGTTGACTCGCCGGAGGGTGTCCCTGATCTCGGTCTAGGCCAAATTTCACCGTCTCTTCATAGCCATTTTCATGGTGAGCTTGATGTGTCGCAGCAGGGTAGGAGGCATTACATGGATCTTGAGGAGTCCAGGGCCTGTGAGTCTTCCCACTGGTCACTTTAG 1110 0.4991 MSSGSVTKAPPSSSSSPNSSTESLDGLKFGQKIYFEDVSVAAAATTQGAKTSGGISSSSSSSKKGRGGSVQPAHPPRCQVEGCKVDLSGAKAYYSRHKVCAMHSKSPTVIVAGLEQRFCQQCSRFHLLSEFDQGKRSCRRRLAGHNERRRKPPPSSILTSRYGRLSSPIFADNNGRAGGFLMEFASYPKLTLRNTLPTPRSAEPSPGNHAATLTWQASSDTAAEFFLQGSGSGGGTGLLGSKHPLVESYAGVTDSNCALSLLSSQTWGSRITQPSVELNNNLLNFNGTSMTQFTAASSPVAAIHQLPNATSWYLKGVDSPEGVPDLGLGQISPSLHSHFHGELDVSQQGRRHYMDLEESRACESSHWSL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00209 369 MobiDBLite consensus disorder prediction 45 76 - -
Lapu7g00209 369 ProSiteProfiles Zinc finger SBP-type profile. 75 152 IPR004333 GO:0003677
Lapu7g00209 369 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 338 IPR044817 GO:0003677
Lapu7g00209 369 MobiDBLite consensus disorder prediction 45 67 - -
Lapu7g00209 369 Pfam SBP domain 78 151 IPR004333 GO:0003677
Lapu7g00209 369 FunFam Squamosa promoter-binding-like protein 14 69 139 - -
Lapu7g00209 369 SUPERFAMILY SBT domain 76 157 IPR036893 GO:0003677|GO:0005634
Lapu7g00209 369 Gene3D - 68 139 IPR036893 GO:0003677|GO:0005634
Lapu7g00209 369 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00209 Lapu-Chr7 2335771 2339934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00209 27 369 SBP-box Gene Family AT2G42200 40.379 5.44e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lapu7g00209 SBP 4.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00209 - - gmx:100789301 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00209 7 2335771 2339934 Lapu7g00209 7 2335771 2339934 ECH