Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00208 ATGAACGAGTACAAGATTGATTGTGTTGGACGGATTCAACAAAGCTATTGTCTAAATGGGGATTTGAGTTCAGAGTTTGGCAATTGTTCTAGTCAATATTTTGATATTATACAGGCTTCAAATATGGGAACTTGCAATCAGCCACTTGCTATGGCCAGTGGTGGAGGAGTTGAACAGGAACCACACATAGGCCAAACTAAATCATCTAGCAGCATTATCAGCCGTTTTGAGTCACCAGCTTCAGCCTTTTATGCAACAGAAATCTGCATGGGTTTCCCACAACATGATAGACTAGTTGGTAACCCCTCTTTGATATCTCAATTCTCTAAGATTAGTGATGTAGAATTCCCTTTGTATCAATCTCCCAGGCAAAACCTTTTCTTGGCTTCATTGGCAAACCAACCTGCCCCCAACTTTGAGTTGTCAAATCCCTTGCAAGCAATGCTCATATCTCATGTGAATAGAGATCAATGTATTAGATCTCCTGAAAAATCTAATAAAATCCCATGTGGGAATTTCCCTGGCAGCAGTTTTCTTCCAATTGAACAACCGAAGTTGTTCAGTGATGATGCTGCTAGCCCTTCAATTCCTTCTAAAGGAAATCAGGGTCAAACAGATTCTTGTGGCTCATACAATTTACCTGCAGCACAGATTAGCTTCTCTTCTCAGCAAGAGATGCTGTCACCAACACTCTCAGCAGGTAGCTTGTTAACTTCTTCTGGAAACTCTACTTCAAATGGAGCAGTAGTCTCAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAAGCAACGCCAAAAGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTGAAAAGTCATTTGCAGAAATATAGAATTGCCAAATACATGCCACAATCAACTCAAGGGAAATCTGAGAAAAGAACCAATGTAGAGAATGTGCATCTTGATGCCAAAACTGGTTTGCAAATTAGAGAGGCACTTCAGTTGCAGCTAGATGTTCAGAGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAGCAGCTGAAAATGATGTTTGACCAACATCAGAAGACAAGTGATAGCAACTTGAGTACTCAGAATTTGGGCAATACAACTAACAATGATAGACCTATTATTTCTAAAGATGTTCAGGTTTCCATTTCTGAAGGATCTGAAAATTCCTTATTCCTTCCAACCTAA 1275 0.4008 MNEYKIDCVGRIQQSYCLNGDLSSEFGNCSSQYFDIIQASNMGTCNQPLAMASGGGVEQEPHIGQTKSSSSIISRFESPASAFYATEICMGFPQHDRLVGNPSLISQFSKISDVEFPLYQSPRQNLFLASLANQPAPNFELSNPLQAMLISHVNRDQCIRSPEKSNKIPCGNFPGSSFLPIEQPKLFSDDAASPSIPSKGNQGQTDSCGSYNLPAAQISFSSQQEMLSPTLSAGSLLTSSGNSTSNGAVVSSKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSEKRTNVENVHLDAKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQHQKTSDSNLSTQNLGNTTNNDRPIISKDVQVSISEGSENSLFLPT* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00208 424 Gene3D - 252 311 - -
Lapu7g00208 424 MobiDBLite consensus disorder prediction 194 208 - -
Lapu7g00208 424 NCBIfam myb-like DNA-binding domain, SHAQKYF class 253 308 IPR006447 GO:0003677
Lapu7g00208 424 SUPERFAMILY Homeodomain-like 251 307 IPR009057 -
Lapu7g00208 424 Pfam Myb-like DNA-binding domain 257 306 IPR001005 -
Lapu7g00208 424 MobiDBLite consensus disorder prediction 379 401 - -
Lapu7g00208 424 Pfam MYB-CC type transfactor, LHEQLE motif 336 383 IPR025756 -
Lapu7g00208 424 Coils Coil 339 359 - -
Lapu7g00208 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 252 310 IPR017930 -
Lapu7g00208 424 MobiDBLite consensus disorder prediction 189 208 - -
Lapu7g00208 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 233 392 IPR044848 GO:0003700
Lapu7g00208 424 FunFam Myb family transcription factor 252 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00208 Lapu-Chr7 2314698 2317507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00208 238 379 G2-like Transcription Factor Family AT4G28610 59.310 3.78e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu7g00208 Myb_DNA-binding 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00208 - - gmx:100780919 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00208 7 2314698 2317507 Lapu7g00208 7 2314698 2317507 ECH