Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00196 ATGTTTTCGTGGCTGGCAAGGATAGTGTCGGCGTGCTTGAGACCGGTGAGGCGATATGCGCGTATGAGCAAGGATGACTTCGACGATGCCGCCGCCGCCGGTGACGCGCTCGTGTGGCACCGCGACCTCGAGAAGCACTCACGCGGCGAGTTCTCCTTCGCGGTCGTGCAGGCCAACGAAGTCATCGAGGATCAAAGCCAGGTGGAGACCGGCGCCGATGCCGTCTTCGTCGGCGTCTACGACGGACACGGCGGCGCCGAAGCATCGCGCTTCATCAACGATCACCTTTTCCATAATCTCATGAGAGTTGCTCAAGAAAGTGGTTCTATCTCTGAAGATATTATCAAGAATGCTGTTTCTGCTACTGAGGATGGGTTTCTGACTCTTGTTCGAAGGAGTTATGGAATAAAGCCACTGATAGCAGCAATGGGTTCCTGTTGCCTGGTTGGTGTTATCTGGAAAGGAACTCTATATATTGCGAATCTCGGAGACTCTCGTGCTGTAATTGGTTCTGTAGGTAGATCTAACAAGATCATTGCTGAACAGTTGACCAAAGAGCACAATGCTAGCAAAGAGGAGGTTAGACGAGAACTCAGGTCTTTGCATCCAGAAGATTCACAAATTGTAGTTATGAAGCAAGGAACCTGGCGCATTAAAGGCATCATCCAGGTATCCAGATCTATAGGAGATGCATATTTGAAGCGGCCAGAGTTCTCATTCGACCCGTCATTCCCACGGTTCCATCTGCCTGAACCTATTCGCCGGCCTGTGCTAACCGCAGAACCATCTGTATGCTCAAGAGTTTTAAGACCTAATGATAAGTTCGTTATCTTTGCATCTGATGGACTTTGGGAGCACTTGACAAACCAGGAAGCTGCTGAGATTGTTCATAACAATCCACGAACTGGGATTGCAAGAAGACTTCTTATGGCAGCTTTGAATGAGGCAGCTAGGAAAAGGGAAATGAGATATAAAGACCTTCAGAAGATTGGAAAGGGGATTAGGCGTTTCTTCCATGATGATATCACAGTGGTTGTTGTCTTCATTGACCATGAGTTGGGTGGCAAGAAGGTTACAGTTCCTGAGTTGTCCATCAAAGGGTTTATTGACACAGTTGGACCATCAAATTTTAGAAATTTGCAGGGATTGGAATGA 1155 0.4797 MFSWLARIVSACLRPVRRYARMSKDDFDDAAAAGDALVWHRDLEKHSRGEFSFAVVQANEVIEDQSQVETGADAVFVGVYDGHGGAEASRFINDHLFHNLMRVAQESGSISEDIIKNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVIWKGTLYIANLGDSRAVIGSVGRSNKIIAEQLTKEHNASKEEVRRELRSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSVCSRVLRPNDKFVIFASDGLWEHLTNQEAAEIVHNNPRTGIARRLLMAALNEAARKREMRYKDLQKIGKGIRRFFHDDITVVVVFIDHELGGKKVTVPELSIKGFIDTVGPSNFRNLQGLE* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00196 384 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Lapu7g00196 384 Gene3D - 34 357 IPR036457 -
Lapu7g00196 384 PANTHER PROTEIN PHOSPHATASE 48 347 IPR015655 GO:0004722|GO:0006470
Lapu7g00196 384 Coils Coil 180 200 - -
Lapu7g00196 384 Pfam Protein phosphatase 2C 72 316 IPR001932 -
Lapu7g00196 384 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Lapu7g00196 384 FunFam Probable protein phosphatase 2C 42 41 357 - -
Lapu7g00196 384 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Lapu7g00196 384 SMART PP2C_4 40 347 IPR001932 -
Lapu7g00196 384 CDD PP2Cc 51 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00196 Lapu-Chr7 2170611 2175050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00196 1 377 PP2C-type Phosphatase Gene Family AT5G06750 70.619 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00196 K01102 - gmx:100778238 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00196 7 2170611 2175050 Lapu7g00196 7 2170611 2175050 ECH
Lapu7g00196 7 2170611 2175050 Lapu3g03080 3 54063702 54072296 ECH