Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00192 ATGCACCTCTCTTGGTTAGTCAAATATCAATATGCAGCAACAATCTTCGTTACTATTGCCCTTACCAAAGTTACTTGTTTTTATTTCAATTTCCCTACCTTCCAACCAGAGGATGAGTCTGATTTATGGCTGAGCAAGAATTCAAAAATATACTTGGATGCCATCCAAGTAACCCCCGATATTCGTGGTCCCATACATGATTATTCTGGACGTGCTTTTTACAGAAAACCATACCAGCTTTGGAAACAGAAGAAGAACCAAAACCAAATAGCTTCCTTCAACACCACTTTTGTGCTCAACATCACTCCAGAAACTACCCCTGGTGGTGAAGGCGTGGCCTTTATCTTAACTTCGGATACGACTCTCCCAGAAAACAGTGATGGAGAATGGCTTGGTATTGTAAATGCTAGTTCCAATGGCACTTCACAGGCTGGTATTCTAGCAGTGGAGTTTGATACAAGACACAGTTTCACAGAAGATGGCCCTGACAATCATGTTGGCATCAACATAAACAGCATCAATTCCATCCAACAGGTTTCATTAATAAACTCTCGGGTCAATCTTTCCTCAGGTCAAGATGTCAAATTTCGTATTCAGTACTTCAATGATACAATATCAGTTTTTGGTGCCACGAATGGAACTTCTGAAGAATCGATGGAGACCCTCTTGGTAACTCCACCTCTTAATCTGTCTTCCTTTCTTCAACAAGAGGTTTACCTTGGTTTCTCCGCCTCAACGAGTAACTACACGGAGCTGAACTGTGTAAGATCGTGGGAATTCAGTGGTGAAGATATTAGAGATAATGGCAAAAGTCTCTTGTGGGTTTATGTTACTGTTCCAGCCGTGATTGTTTTTATTATCATAGGTGGGTTGGTGATCTTTTTCTTGCGCTGGCAGAAGAGTCGCCAGAGAGAGATGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAATATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAGGGAAATAACAAAAGCAACTGGTGGATTCAGCCTTCAAAACAAGCTTGGACAAGGTGGGTTTGGAACTGTTTATAAGGGGCTATTGGAAAATAAGGAGGTAGCTGTGAAGAGAGTCTCCAAGAACTCACGCCAAGGGAAGCAAGAGTTTGTGGCAGAAGTGACAACAATTGGAAGACTTCATCATAGAAATTTGGTGAAACTCACTGGTTGGTGCTATGAGAATAGAGAGCTCCTCCTCGTGTACGAGTTCATGCCTAATGGCAGCCTAGACAAGTACCTCTTTGGTGACAAAGATTTTGGTAATTATGGACCTGAAGGAGGGTATTCTTTAACACTAGACTGGGAAACTAGGCACAGAGTGATTCATGGGGTGGCTCAAGCACTTGACTACCTTCACAATGGGTGTGAGAAGAGGGTTCTCCACAGAGACATCAAGGCCAGCAACATAATGCTGGACTCAGATTACAATGCCAAGTTGGGAGACTTTGGATTGGCTAGAACAATTCAGCAGAGAAATGAAACTCATCACTCTACAAAAGAGATTGCGGGCACACCCGGGTACATGGCCCCAGAAACCTTTCTCACAGGGAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGATTTGTATGGGAAGGGGAAAGTAGTTGGTGCTGTTGATGCAAGGTTGAAGAAGGAGGAGATTAAGGAGGAAGAGGTGGAGTGTGTTCTTGCTCTTGGCTTGGCTTGTTGCCATCCAAACCCACACCAAAGACCATCCATGAGAACTGTTCTACAGGTTCTGAATGGGGAAGCACCTCCACCTGAAGTGCCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCATCCTTCAAAGATGCTGAAGATAGCTCCCTCATCCAGGGAACACTCACTCCTTTCACTGAAATCACTGGAAGATGA 2013 0.4401 MHLSWLVKYQYAATIFVTIALTKVTCFYFNFPTFQPEDESDLWLSKNSKIYLDAIQVTPDIRGPIHDYSGRAFYRKPYQLWKQKKNQNQIASFNTTFVLNITPETTPGGEGVAFILTSDTTLPENSDGEWLGIVNASSNGTSQAGILAVEFDTRHSFTEDGPDNHVGININSINSIQQVSLINSRVNLSSGQDVKFRIQYFNDTISVFGATNGTSEESMETLLVTPPLNLSSFLQQEVYLGFSASTSNYTELNCVRSWEFSGEDIRDNGKSLLWVYVTVPAVIVFIIIGGLVIFFLRWQKSRQREMPEDAYPRIEDQIQYSSMAPKKFRLREITKATGGFSLQNKLGQGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGRLHHRNLVKLTGWCYENRELLLVYEFMPNGSLDKYLFGDKDFGNYGPEGGYSLTLDWETRHRVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGNVYAQDDYKNSIVYWVWDLYGKGKVVGAVDARLKKEEIKEEEVECVLALGLACCHPNPHQRPSMRTVLQVLNGEAPPPEVPKERPAFMWPAMPPSFKDAEDSSLIQGTLTPFTEITGR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00192 670 Gene3D - 26 271 - -
Lapu7g00192 670 ProSiteProfiles Protein kinase domain profile. 340 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00192 670 Gene3D Transferase(Phosphotransferase) domain 1 415 628 - -
Lapu7g00192 670 ProSitePatterns Protein kinases ATP-binding region signature. 346 367 IPR017441 GO:0005524
Lapu7g00192 670 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Lapu7g00192 670 SMART serkin_6 340 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00192 670 CDD STKc_IRAK 346 625 - -
Lapu7g00192 670 SUPERFAMILY Protein kinase-like (PK-like) 321 623 IPR011009 -
Lapu7g00192 670 FunFam probable L-type lectin-domain containing receptor kinase S.5 415 629 - -
Lapu7g00192 670 Gene3D Phosphorylase Kinase; domain 1 325 414 - -
Lapu7g00192 670 Pfam Legume lectin domain 29 267 IPR001220 GO:0030246
Lapu7g00192 670 PANTHER - 59 630 - -
Lapu7g00192 670 FunFam Probable L-type lectin-domain containing receptor kinase S.5 325 414 - -
Lapu7g00192 670 Pfam Protein kinase domain 341 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00192 670 FunFam Probable L-type lectin-domain containing receptor kinase S.5 26 269 - -
Lapu7g00192 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Lapu7g00192 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 261 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00192 Lapu-Chr7 2138629 2140761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00192 69 637 Receptor kinase-like Gene Family AT5G10530 40.304 2.55e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu7g00192 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00192 - - gmx:100785031 1145.18