Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00185 ATGTTGTGTTGCGGAGGTGCTGAAGAGGATTTTGGCATTCCACCTGCAAACCAATACAATGCAGCACTAGAAAAGGGTAGTGCATATGGGGGTGGAGGAGGTGATAGAGGAGAGCCAAGGGGCAATGTTATCAAAACTGGTGCTCCACAAAAGGAATTACCAATTGAGATTCCTGCCATAAAATTGGATGAGTTAAATCAGTTAACAGAAAACTTTGGTACAAAGGCTTTGATAGGAGAAGGTTCTTATGGAAGGGTTTACTTTGCAAAGATGAGTGATGGTATGGAGGTTGCAATCAAGAAGCTAGATACTAGTTCTTCTCCGGAACCTGACTCTGATTTTGCAACACAATTATCAGTTGTTTCAAGATTGAAAAGTGACCATTTTGTGGAGTTGATGGGATATTGTTTAGAGGAAAATAACCGAATTTTGGTTTATCAATATGCGAGTTTGGGTTCTTTGCACGACATATTACACGGAAGAAAAGGAGTGCAAGGTGCTGAACCTGGACCAGTTTTAAATTGGAGCCAAAGAGTAAAAATTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGTGTCAACCTTCTATAGTTCATCGCGATGTTCGATCTAGCAATGTCTTACTCTTTAATGACTATGAAGCCAAGATTGCAGATTTCAACTTGACAAACCAATCTTCTGACACTGCAGCTCGACTACACTCAACAAGAGTCTTAGGAACATTTGGTTATCATGCTCCAGAGTATGCAATGACAGGACAAATAACCCAAAAAAGTGATGTTTATAGTTTTGGGGTTGTTCTTTTGGAACTTTTAACAGGAAGAAAGCCTGTAGATCATACAATGCCTAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGATTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAACTAAACAATGAATACCCTCCCAAGGCAATTGCTAAGTTAGCAGCAGTTGCAGCACTTTGTGTGCAATATGAAGCTGATTTCAGGCCAAATATGACAATTGTTGTGAAAGCTCTCCAACCACTTCTCAATTCTAAACCCACTGGCCCAGACCCTAACCCTAACACTTAA 1104 0.4031 MLCCGGAEEDFGIPPANQYNAALEKGSAYGGGGGDRGEPRGNVIKTGAPQKELPIEIPAIKLDELNQLTENFGTKALIGEGSYGRVYFAKMSDGMEVAIKKLDTSSSPEPDSDFATQLSVVSRLKSDHFVELMGYCLEENNRILVYQYASLGSLHDILHGRKGVQGAEPGPVLNWSQRVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFNDYEAKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPTGPDPNPNT* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00185 367 Gene3D Transferase(Phosphotransferase) domain 1 150 360 - -
Lapu7g00185 367 FunFam PTI1-like tyrosine-protein kinase 3 150 359 - -
Lapu7g00185 367 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 34 358 - -
Lapu7g00185 367 SMART tyrkin_6 72 350 IPR020635 GO:0004713|GO:0006468
Lapu7g00185 367 Gene3D Phosphorylase Kinase; domain 1 46 148 - -
Lapu7g00185 367 FunFam probable protein kinase At2g41970 45 148 - -
Lapu7g00185 367 SUPERFAMILY Protein kinase-like (PK-like) 53 350 IPR011009 -
Lapu7g00185 367 ProSiteProfiles Protein kinase domain profile. 72 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00185 367 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Lapu7g00185 367 ProSitePatterns Tyrosine protein kinases specific active-site signature. 200 212 IPR008266 GO:0004672|GO:0006468
Lapu7g00185 367 Pfam Protein tyrosine and serine/threonine kinase 76 350 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00185 Lapu-Chr7 2026842 2029805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00185 63 353 Trihelix Transcription Factor Family AT5G38560 45.791 1.75e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lapu7g00185 PK_Tyr_Ser-Thr 1.7e-46 CL0016