Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00183 ATGGACAAGACAGCATCAACGACAACCTCGGAGAGAGAAGTCCACGACTTCATGAACGTGGACTCCTTCTCCCAACTGCCCTTCATCCGCCCTGCTCCTCTGGTTAAAGAGAAGTCAGGCATTCGTCTCTTCGGCATAGAATTCGCAGGAGGAAACAATACTGTTGTTTCGGCGGACGAGTCTGACTCTGCAGAAACAACAACCAACAACAACAACCTCAACTCATTCGAACTTGATGCTAACAAGGACGATACTACAACCACCACTGTCACTGTTACTGATAACAGCAGCGAAAGCAGTCGCAGGTTCGAGTGCCACTACTGCTGCCGGAACTTCCCCACCTCCCAAGCCCTCGGTGGTCACCAAAACGCCCACAAACGCGAACGCCAACACGCTAAACGCGCGCACCTTCAGTCAACGATGGTGCACGGAAGCACGTTCTCTGATGCGCACCATGTCTACAACCTCATGAACTACCGCTTCGGTTCCGCTCCAACACCACCAATGCCGTATCCGACGTGGAACAACGCCGCCGCCGTCACCACGGCCACTGCCACGAACACGAGGTTCTACGGAACGACACCGTTTTCCCACAGCCACCACCAGCACCAACAACCTATTAACGGAAACCCTTTGGCTTTGTGGCGAATCCCGAGCAATAACCCTAGTTTCAGCCACGAACGGTCGTCGTTGCCGCCTTTGTTCGCGTCGGAGGAATTAACGAACGTGAGAGCCTCGCAGGTTGTGGGAGCCTCGGGGTCGCAAAACCGCTACGTGTATGACTCCAAACGCGGAAGTGTGCACGACCATGTGAGTTTGGATCTTCATCTGTAA 834 0.5396 MDKTASTTTSEREVHDFMNVDSFSQLPFIRPAPLVKEKSGIRLFGIEFAGGNNTVVSADESDSAETTTNNNNLNSFELDANKDDTTTTTVTVTDNSSESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYNLMNYRFGSAPTPPMPYPTWNNAAAVTTATATNTRFYGTTPFSHSHHQHQQPINGNPLALWRIPSNNPSFSHERSSLPPLFASEELTNVRASQVVGASGSQNRYVYDSKRGSVHDHVSLDLHL* 278
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00183 277 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Lapu7g00183 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Lapu7g00183 277 SUPERFAMILY beta-beta-alpha zinc fingers 100 131 IPR036236 -
Lapu7g00183 277 Gene3D Classic Zinc Finger 79 155 - -
Lapu7g00183 277 PANTHER ZINC FINGER PROTEIN GIS 1 277 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu7g00183 Lapu-Chr7 1929702 1931050 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00183 8 277 C2H2 Transcription Factor Family AT2G41940 40.426 7.05e-46 153
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00183 - - vun:114190818 483.411
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00183 7 1929702 1931050 Lapu7g00183 7 1929702 1931050 ECH