Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00177 ATGGGCGCCAATTCGTTGCCATCGGCGGAATCCAACTTCGATCTCGACGAGCAGATCTCGCAGCTCATGCAATGCAAACCGCTATCCGAGCACCAGGTTAGAGTTTTATGCGAGAAGGCTAAGGAGATTTTGATGGATGAAAGTAATGTCCAGCCCGTGAAAAGCCCCGTGACAATTTGTGGTGATATTCATGGGCAGTTTCATGATCTTGCAGAACTATTTCGAATTGGAGGGAAGTGTCCAGATACTAATTACTTGTTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTGGAAACTGTAACAGTACTGATTAATTATTCTCTCCAGCTTCTTGTGTCACTGAAAGTGCGTTATCCTCAGCGAATTACTATTCTTAGAGGAAACCATGAAAGTCGTCAGATCACTCAAGTATATGGTTTCTACGATGAGTGCCTCAGAAAGTATGGTAATGCTAATGTTTGGAAGGTCTTTACTGACCTCTTTGATTTCTTTCCATTGACTGCATTGGTTGAGTCTGAAATATTCTGTTTGCATGGTGGGCTTTCACCTTCAATTGAGACTCTTGATAACATAAGGAACTTTGATCGTGTTCAAGAAGTTCCTCATGAAGGGCCGATGTGTGATCTGTTATGGTCTGACCCTGATGATAGGTGCGGCTGGGGAATTTCTCCTCGAGGTGCAGGATATACTTTTGGCCAGGATATATCCGAACAATTTAATCACTCAAACAAGCTTAAGTTAATTGCTAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGAACAGAAGGTGGTTACCATTTTTAGTGCACCTAACTATTGTTACCGATGTGGGAATATGGCTTCGATTTTGGAGGTTGACGATTCCAAGGGCCACACATTTATCCAGTTTGACCCTGCTCCCAGAAGAGGAGAACCCGATGTTACCCGTAGAACGCCTGATTACTTCCTATGA 969 0.4334 MGANSLPSAESNFDLDEQISQLMQCKPLSEHQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTVLINYSLQLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKVFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHSNKLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDSKGHTFIQFDPAPRRGEPDVTRRTPDYFL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00177 322 MobiDBLite consensus disorder prediction 303 322 - -
Lapu7g00177 322 PRINTS Serine/threonine phosphatase family signature 161 187 IPR006186 GO:0016787
Lapu7g00177 322 PRINTS Serine/threonine phosphatase family signature 56 83 IPR006186 GO:0016787
Lapu7g00177 322 PRINTS Serine/threonine phosphatase family signature 190 217 IPR006186 GO:0016787
Lapu7g00177 322 PRINTS Serine/threonine phosphatase family signature 246 266 IPR006186 GO:0016787
Lapu7g00177 322 PRINTS Serine/threonine phosphatase family signature 268 284 IPR006186 GO:0016787
Lapu7g00177 322 PRINTS Serine/threonine phosphatase family signature 85 112 IPR006186 GO:0016787
Lapu7g00177 322 PRINTS Serine/threonine phosphatase family signature 126 150 IPR006186 GO:0016787
Lapu7g00177 322 SMART pp2a_7 28 306 IPR006186 GO:0016787
Lapu7g00177 322 FunFam Serine/threonine-protein phosphatase 8 322 - -
Lapu7g00177 322 Gene3D - 8 322 IPR029052 -
Lapu7g00177 322 Pfam Calcineurin-like phosphoesterase 56 255 IPR004843 GO:0016787
Lapu7g00177 322 ProSitePatterns Serine/threonine specific protein phosphatases signature. 127 132 IPR006186 GO:0016787
Lapu7g00177 322 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 14 322 IPR047129 GO:0004722
Lapu7g00177 322 SUPERFAMILY Metallo-dependent phosphatases 10 307 IPR029052 -
Lapu7g00177 322 CDD MPP_PP2A_PP4_PP6 14 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00177 Lapu-Chr7 1855137 1863940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00177 20 252 Calmodulin-binding Proteins AT5G63870 33.818 1.32e-31 118