Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00153 ATGGGCAACAACTGCGTGGGACCGAACGCCGGTAACGGCTTCCTCCAGTCCGTTACGGCGGCGGTGTGGAAGACCCGCCCGCCGGAGTCCCGCCTTCCGCCGCCTTCCTCCGATGCCAAAACCTTGCCTGCGGTACCGAACGCCGAGAAAGCCTCGGAACCCGCGCCTTCCCAATCCTCGGATCCTCCGATGCGGGTGCAGAACACACCGCCTGAGCAGCTCAAAATCCACGCTTCGGCGGAGGCGAAGCCGCTCCCGCTGGACCACGAGAAACCAGCGTCGAGCCACACCGAGCCGGCTACCGGCGACAAGGCGAAGAAACCCACGCACGTGAAACGGGTGTCCAGTATGGGACTTCAAGTGGAGTCGGTGCTGGGTCGAAAAACAGAAAACATGAAGGAGTTCTTCAGCTTGGGGAGGAAGCTGGGGCAGGGCCAATTCGGGACGACGTTTCTGTGCGTGCAAAAGGGGACAAACAAGGACTTCGCGTGCAAGTCTATCGCGAAGCGCAAGTTGACGACGCAGGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATCATGCACCACTTGGCAGGGCACCCCAACGTGATTCAGATCATTGGGGCTTACGAGGACGCCGTTGCGGTCCACGTTGTGATGGAGCTCTGCGCTGGAGGGGAGCTCTTTGACAGGATCATACAGAGGGGGCATTACACCGAGAGGAAGGCCGCGGAACTTGCTAGATTGATTGTTAGTGTGGTGGAGGCTTGTCACTCTCTCGGGGTCATGCACAGGGATTTGAAGCCCGAGAATTTTTTGTTCGTTAATCAACAGGAAGAGTCTCCCCTTAAGACCATTGATTTTGGACTCTCCGTGTTCTTTAGACCAGGTGAAACATTCACTGATGTGGTTGGTAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGCACTATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATCTACATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAAACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAGCTTGACTTTGTTTCCGAACCCTGGCCAAGCATATCTGAAAGCGCAAAGGATCTTGTTCGAAGGATGCTTGTAAGGGACCCTAAGAAGCGGATGACAGCACATGAAGTTCTTTGCCACCCATGGGTTCAAGTCGGAGGCGTTGCTCCTGATAAACCCCTTGATTCTGCTGTCTTGTCTCGTTTGAAGCAGTTCTCTGCAATGAACAAGCTCAAAAAAATAGCGATTCGAGTAATTGCTGAAAGTCTGTCTGAGGAAGAAATTGCAGGACTGAAAGAAATGTTCAGGATGATAGACTCAGATAATAGCGGTCAGATCACTCTTGAGGAATTGAAAAATGGTTTGGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAAATTACTTGGTTAATGCAAGCGGCAGACGTTGATAACAGTGGTACCATAGACTACGGTGAATTCATAGCAGCAATGCTACACCTAAACAAGATCCAGAAGGAGGATCATCTATATGCAGCATTCACATACTTTGACAAAGATGGGAGTGGATACATTACACACGATGAGCTCCAACAAGCCTGCGAACAGTTCGGCTTACAGGATTATCACCTGGATGAGATAATACGTGAAGTTGACCAGGATAATGATGGACGCATTGATTACAGTGAGTTTGCAGCAATGATGCAAGACACTGGTTTTGGCAAAAAGTGA 1743 0.5089 MGNNCVGPNAGNGFLQSVTAAVWKTRPPESRLPPPSSDAKTLPAVPNAEKASEPAPSQSSDPPMRVQNTPPEQLKIHASAEAKPLPLDHEKPASSHTEPATGDKAKKPTHVKRVSSMGLQVESVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLIVSVVEACHSLGVMHRDLKPENFLFVNQQEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKHYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPSISESAKDLVRRMLVRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFRMIDSDNSGQITLEELKNGLERVGSVLKDSEITWLMQAADVDNSGTIDYGEFIAAMLHLNKIQKEDHLYAAFTYFDKDGSGYITHDELQQACEQFGLQDYHLDEIIREVDQDNDGRIDYSEFAAMMQDTGFGKK* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00153 580 PANTHER SERINE/THREONINE-PROTEIN KINASE 128 568 - -
Lapu7g00153 580 CDD STKc_CAMK 135 393 - -
Lapu7g00153 580 SMART efh_1 513 541 IPR002048 GO:0005509
Lapu7g00153 580 SMART efh_1 441 469 IPR002048 GO:0005509
Lapu7g00153 580 SMART efh_1 547 575 IPR002048 GO:0005509
Lapu7g00153 580 SMART efh_1 477 505 IPR002048 GO:0005509
Lapu7g00153 580 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Lapu7g00153 580 Pfam EF-hand domain pair 512 573 IPR002048 GO:0005509
Lapu7g00153 580 Pfam EF-hand domain pair 442 502 IPR002048 GO:0005509
Lapu7g00153 580 FunFam Calcium-dependent protein kinase SK5 222 406 - -
Lapu7g00153 580 SUPERFAMILY EF-hand 434 573 IPR011992 -
Lapu7g00153 580 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Lapu7g00153 580 ProSiteProfiles EF-hand calcium-binding domain profile. 509 544 IPR002048 GO:0005509
Lapu7g00153 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lapu7g00153 580 MobiDBLite consensus disorder prediction 52 67 - -
Lapu7g00153 580 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Lapu7g00153 580 FunFam Calcium-dependent protein kinase 1 402 576 - -
Lapu7g00153 580 FunFam Calcium-dependent protein kinase 1 138 221 - -
Lapu7g00153 580 ProSitePatterns EF-hand calcium-binding domain. 522 534 IPR018247 -
Lapu7g00153 580 Pfam Protein kinase domain 137 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00153 580 SUPERFAMILY Protein kinase-like (PK-like) 136 395 IPR011009 -
Lapu7g00153 580 Gene3D - 410 503 - -
Lapu7g00153 580 SMART serkin_6 136 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00153 580 ProSitePatterns Protein kinases ATP-binding region signature. 142 169 IPR017441 GO:0005524
Lapu7g00153 580 ProSitePatterns EF-hand calcium-binding domain. 556 568 IPR018247 -
Lapu7g00153 580 MobiDBLite consensus disorder prediction 21 114 - -
Lapu7g00153 580 Gene3D - 420 572 - -
Lapu7g00153 580 ProSiteProfiles Protein kinase domain profile. 136 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00153 580 Gene3D Transferase(Phosphotransferase) domain 1 222 398 - -
Lapu7g00153 580 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Lapu7g00153 580 Gene3D Phosphorylase Kinase; domain 1 138 221 - -
Lapu7g00153 580 MobiDBLite consensus disorder prediction 82 110 - -
Lapu7g00153 580 ProSiteProfiles EF-hand calcium-binding domain profile. 547 578 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00153 Lapu-Chr7 1656960 1662722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00153 1 579 EF-hand Containing Proteins AT2G38910 75.472 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu7g00153 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00153 K13412 - gmx:100813232 1018.07