Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00134 ATGAGCAACAGTACATATGATTCATCTGGGTTCCTTGGCTCCAGCAACATAAGTGGCTTTGGCATGGGCATAGGAATTTCAATTGGGATTCTTCTGCTTATCACAACCATCACACTCACCTCCTACTTCTGCACCAGGGGACAGGTGCCAACTGCTCCAAGGAGAAGAACTACGACCACTGCTCCACAATTCCTTGAGCCACAGCACGCAATAGTTGATGTTGGGCTGGATGAAGCCACAATCAAGAATTACCCCAAGATGCTGTACTCTGAAGCCAAGCTAAGCAAATCTGATTCCACAGCAACAAGCTGTTCCATATGTCTGGGAGATTACAAAGGTTCTGATTTGCTAAGGGTGTTGCCTGATTGTGAACATGTCTTTCACCTAAAGTGCATAGACCCATGGTTGAGGCTGCATCCAACTTGTCCTCTCTGCAGAACATCCCCTATTCCGACACCTCTCTCGACACCTCTGGCAGAAGTTGTTCCATTAGCAACAAGGCGAGATTAA 510 0.4706 MSNSTYDSSGFLGSSNISGFGMGIGISIGILLLITTITLTSYFCTRGQVPTAPRRRTTTTAPQFLEPQHAIVDVGLDEATIKNYPKMLYSEAKLSKSDSTATSCSICLGDYKGSDLLRVLPDCEHVFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLATRRD* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00134 169 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 160 IPR045899 -
Lapu7g00134 169 SMART ring_2 104 145 IPR001841 -
Lapu7g00134 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 150 IPR013083 -
Lapu7g00134 169 CDD RING-H2_EL5-like 103 146 - -
Lapu7g00134 169 FunFam E3 ubiquitin-protein ligase ATL6 66 151 - -
Lapu7g00134 169 Pfam Ring finger domain 103 146 IPR001841 -
Lapu7g00134 169 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Lapu7g00134 169 SUPERFAMILY RING/U-box 80 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00134 Lapu-Chr7 1466059 1466593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00134 7 166 C3H Transcription Factor Family AT2G35910 62.346 1.47e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00134 - - gmx:121172638 248.825