Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00132 ATGCAAACTGCTTACCTGAAAGAGCATGAAGGAATGGTTCACAATTCTGTTGCACAATTGCCATCAGTAACTTCAGCTCAATGGTGGAGTGGCTTAGGATCTCAACCAGTTTGTGGGGATTATTGTGGCCAAATCAAGCCCTTTTCGTTGGAGTTTCCGAACTACGTCGACCAATTTGCCGGAGATGACTGTAAAATGTTGGGTGATGCCCAAAATCCTCAGGCAACCTTATCACTGCAGCCATCACTTGCTGAGCCCCCCAACCATTTCGATATAGGGTTCAATCAGCCTATGATCTGTGCACCATATCCTTGTATGGATCAATATTGTGGGCTCATGTCACCTTATGGACCTCAAATTTCGGGACGTATAATGCTTCCGCTTAACATGGCATCTGATGATGGACCAACCTACGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCCGTCAGTCCCGTGCTAAGGCTGTTCTTGAGAATAAACTGATCAAACGTCGGAAGCCTTATATGCACGAATCTCGCCATCTACATGCAATGAGGCGACCAAGAGGAAATGGTGGTCGCTTCTTGAACACAAAAAACTCTGGTAATGGAAATGGTGGAAATGAAACTGAAGTGAACAGAACCGGTGGCCTACAATTTCTGTCCAGTGCCTCTCAGAGTTCTGAAATGCTGCAATCTGATGTTGGAACTTTAAACTCGCCAATGGAGACAGATGAATGCAGTCCAAACCTCTCTAGTTCAGAAGTGAGTAGCATGTATTCGCGAGAAGGTTTCGATGGTTTTTCTGTCAATCCTCTTGGATCTTCTGTCCATTCTATAGTAAACCATTCTTGGCTAATTTCTTAG 852 0.4472 MQTAYLKEHEGMVHNSVAQLPSVTSAQWWSGLGSQPVCGDYCGQIKPFSLEFPNYVDQFAGDDCKMLGDAQNPQATLSLQPSLAEPPNHFDIGFNQPMICAPYPCMDQYCGLMSPYGPQISGRIMLPLNMASDDGPTYVNAKQYHGIIRRRQSRAKAVLENKLIKRRKPYMHESRHLHAMRRPRGNGGRFLNTKNSGNGNGGNETEVNRTGGLQFLSSASQSSEMLQSDVGTLNSPMETDECSPNLSSSEVSSMYSREGFDGFSVNPLGSSVHSIVNHSWLIS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00132 283 PRINTS CCAAT-binding transcription factor subunit B signature 167 190 IPR001289 GO:0003700|GO:0006355
Lapu7g00132 283 PRINTS CCAAT-binding transcription factor subunit B signature 136 158 IPR001289 GO:0003700|GO:0006355
Lapu7g00132 283 MobiDBLite consensus disorder prediction 189 249 - -
Lapu7g00132 283 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 136 190 IPR001289 GO:0003700|GO:0006355
Lapu7g00132 283 SMART cbf3 132 193 IPR001289 GO:0003700|GO:0006355
Lapu7g00132 283 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 69 256 IPR001289 GO:0003700|GO:0006355
Lapu7g00132 283 Gene3D - 133 195 - -
Lapu7g00132 283 MobiDBLite consensus disorder prediction 181 249 - -
Lapu7g00132 283 ProSiteProfiles NF-YA/HAP2 family profile. 133 193 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00132 Lapu-Chr7 1446857 1450648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00132 20 254 CCAAT-HAP2 Transcription Factor Family AT3G05690 42.424 1.41e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lapu7g00132 CBFB_NFYA 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00132 K08064 - gmx:100794755 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00714 6 7518766 7523899 Lapu7g00132 7 1446857 1450648 PCT