Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00119 ATGGCAATGGCAGTGACACACTCTTTGCCGTTGCTCCTTTTCTCTTTGTGGACGGTGGTTTTAACCGAAACGGACCCGAACGATGTGGGGATTCTGAACAGTTTTCGAAGAGGTTTGAAGAACAAAGAGCTCTTACCGTGGCCGGAAGAAGGAGGAGACCCATGTGGGAATCCTCCATGGAAGTACATCTTCTGCAATGGCAACAGAGTGTCTCAGATTCAGACCAAGAACTTGGGTCTGGTGGGCCCGCTGCCCTCCAACTTCAACAAGCTTTCCATGTTGGAGAATCTGGGTCTGCAGAACAACAACCTCAACGGGCCCTTACCCTCCTTCAATGGCTTGTCAAATTTGAAATACGCATTTCTCAACCGCAACGGCTTTGAATCCATTCCCGGAGATTTTTTCCGAGGGCTTCGGAGTCTCCAGGTGTTGGCTTTGGATTACAATAATCTCAATGCCTCTTCTGGTGGCTGGGTGCTTCCTCCAACTTTGGAAGATTCCGCGCAGTTGAGGAACTTTTCTTGCATGAGCTGCAACTTGGTGGGGCCCATTCCTGTGTTTCTCGGCTCTTTGCCGTCGCTGGAGGTGCTGCAGCTCTCCGGCAACAACTTGACTGGGGAGATTCCGGCGACGTTGAACGCCGTTCCTGCGTTGCGGATTCTCTGGCTGAACAACCAGCGTGGAGACGGACTTACCGGGAAAATCGAAGTTGTTGCGAGCATGATTTCGTTGACGAGTTTGTGGCTTCACGGGAATAAGTTTAGCGGGAGTATTCCGGTGAACATTGGGGATTTGGTTTCTCTGAGGGATTTGGATCTTAATGGGAATGAGTTGGTTGGGTTGATTCCGCGTGGTTTGAGTGGGATGAAGTTGGAGCGGTTGGATTTGAATAATAACCAATTCATGGGTCCGATCCCTGATTTTGCTGCGGATAAAGTGAGTTTTGAAAGCAATGATTTTTGCTTGTCGAAGCCCGGGGCTATGTGTGCGTTTGAGGTGATGGCGCTGTTGGATTTTCTTGGGGGGTTGGGTTACCCGGAGATTTTGGTTGACTCGTGGAGTGGGAATAATCCGTGCGATGGGCCATGGTTGGGGATAAAGTGCAATGGGGATGGAAAGGTGGAAATGATTATTTTGAATAACTTTAATCTTAGTGGTACTTTGAGTGCTTCTGTTGCCAAGTTGGATTCCCTTGTTGGAATAAGGTTGGGAGGTAATGATATCAGTGGTAGGATACCCAGTAATTGGACTAGTTTGAGATCATTGACATTGTTGGATCTGACTGGTAATAACATTTCCCTTCCCTTGCCGAGTTTCGGGAAAGGGGTGAAGCTTGTGATTGATGGAAATCCTCAGTTAGGCGGTGCCCCAGAAGTTTCTCTTTCTCCACCGGGTTCTGCTTCTGGCTTTGGTCCTAGTCCTGGTTCTGGTTCGTCATCTGGTAAGGTTGAACCTCCTTCATCTGATAAGCGTAATCCTACCCCCTCTGAAGCCTCTGGTCCCAATCCAAAGTCTGGTAGTTTTTCTCATGAGTCAAATAATTCCAGAAGGAAAGGCTTGGTTCCAATTGTGGCTCCTATTGCAGGTGTTGCAGCTGCGGCTTTTGTTCTCATTCCGCTTTATGTGTATTGTTTCAGGAAGAGAAAGGGTGTCTCTGAGGGAGCAGGGTCTCTGGTGATCCACCCCAGAGATCCTTCTGATTCGAACAATGTGCTGAAGGTTGTAATTGCTAACAACAGCAATGGGAGTGTTTCCACAGTGACCGGCACTGGGTCTGAGACTCTTCATGGAAGTGGGGAGTCTCGTGTCTTTGAATCCGGGAACCTTGTGATATCTGTTCAGGTTCTTCGAAATGTAACGAAGAATTTTGCACGTGAGAATGAGCTTGGACGCGGTGGATTTGGAGTAGTTTACAAGGGAGAATTGGATGATGGGACTAAGATTGCGGTGAAGCGAATGGAATCGGGTGTTATTACCAGCAAGGCCTTGGATGAGTTCCAGTCAGAGATTGCAGTTCTATCAAAAGTCCGGCACCGGCATTTGGTATCTCTTTTGGGTTATTCAGTTGAAGGTAATGAGAGGATTCTGGTTTATGAGTATATGTCACAAGGGGCTCTCAGTATGCATCTGTTCCATTGGAAGAGCTCGCAACTGGAGCCACTCTCTTGGAAGAGGAGACTCAATATAGCCTTGGATGTTGCCAGAGGAATGGAGTATCTTCATAGTCTGGCACACCAGATCTTCATTCACAGAGATCTTAAATCATCAAATATTTTGCTTGGGGATGACTTTAGAGCAAAAGTCTCGGATTTTGGATTGGTAAAACTTGCTCCTGATGGCAAAAAATCTGTAGTGACCCGGCTTGCTGGTACATTTGGATACTTGGCGCCAGAATATGCAGTGACAGGAAAAGTCACCACCAAAGCAGATGTTTTCAGTTTCGGCGTTGTGCTAATGGAGCTGTTAACTGGATTAATGGCACTTGATGAGGATAGACCCGAGGAAAGCCAGTACTTGGCATCGTGGTTCTGGCATATAAAATCAGACAAGGAGAAACTGATGGCTGCTGTTGACCCTGCCCTTGACATAAAGGAAGAAATGTTCGATATTGTCTCCATCATTGCTGAGTTAGCTGGGCACTGCACTGCCAGAGAACCAAACCAAAGGCCAGATATGAGTCATGCTGTGAATGTTCTTGGACCGCTTGTTGAGAAATGGAAACCATTAGATGATGACACTGAGGAGTATTCTGGCATAGACTATACTCTTCCCCTTAACCAAATGGTGAAGGACTGGCAAGAGACAGAAGGAAAGGAGTTGAGCTATGTGGACCTTCAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGTTTTGCAGAGTCTTTCACTTCTGTTGATGGCCGGTGA 2910 0.4729 MAMAVTHSLPLLLFSLWTVVLTETDPNDVGILNSFRRGLKNKELLPWPEEGGDPCGNPPWKYIFCNGNRVSQIQTKNLGLVGPLPSNFNKLSMLENLGLQNNNLNGPLPSFNGLSNLKYAFLNRNGFESIPGDFFRGLRSLQVLALDYNNLNASSGGWVLPPTLEDSAQLRNFSCMSCNLVGPIPVFLGSLPSLEVLQLSGNNLTGEIPATLNAVPALRILWLNNQRGDGLTGKIEVVASMISLTSLWLHGNKFSGSIPVNIGDLVSLRDLDLNGNELVGLIPRGLSGMKLERLDLNNNQFMGPIPDFAADKVSFESNDFCLSKPGAMCAFEVMALLDFLGGLGYPEILVDSWSGNNPCDGPWLGIKCNGDGKVEMIILNNFNLSGTLSASVAKLDSLVGIRLGGNDISGRIPSNWTSLRSLTLLDLTGNNISLPLPSFGKGVKLVIDGNPQLGGAPEVSLSPPGSASGFGPSPGSGSSSGKVEPPSSDKRNPTPSEASGPNPKSGSFSHESNNSRRKGLVPIVAPIAGVAAAAFVLIPLYVYCFRKRKGVSEGAGSLVIHPRDPSDSNNVLKVVIANNSNGSVSTVTGTGSETLHGSGESRVFESGNLVISVQVLRNVTKNFARENELGRGGFGVVYKGELDDGTKIAVKRMESGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMSQGALSMHLFHWKSSQLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEESQYLASWFWHIKSDKEKLMAAVDPALDIKEEMFDIVSIIAELAGHCTAREPNQRPDMSHAVNVLGPLVEKWKPLDDDTEEYSGIDYTLPLNQMVKDWQETEGKELSYVDLQDSKSSIPARPTGFAESFTSVDGR* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00119 969 FunFam Leucine-rich repeat receptor-like kinase 331 456 - -
Lapu7g00119 969 CDD STKc_IRAK 629 902 - -
Lapu7g00119 969 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Lapu7g00119 969 SUPERFAMILY L domain-like 24 307 - -
Lapu7g00119 969 FunFam Receptor-like kinase TMK4 26 326 - -
Lapu7g00119 969 Gene3D Ribonuclease Inhibitor 331 456 IPR032675 -
Lapu7g00119 969 SUPERFAMILY L domain-like 331 442 - -
Lapu7g00119 969 MobiDBLite consensus disorder prediction 466 514 - -
Lapu7g00119 969 SMART LRR_typ_2 419 442 IPR003591 -
Lapu7g00119 969 SMART LRR_typ_2 191 215 IPR003591 -
Lapu7g00119 969 SMART LRR_typ_2 265 288 IPR003591 -
Lapu7g00119 969 SMART LRR_typ_2 241 264 IPR003591 -
Lapu7g00119 969 SMART LRR_typ_2 138 167 IPR003591 -
Lapu7g00119 969 SMART LRR_typ_2 114 137 IPR003591 -
Lapu7g00119 969 MobiDBLite consensus disorder prediction 949 969 - -
Lapu7g00119 969 ProSiteProfiles Protein kinase domain profile. 623 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00119 969 Pfam Protein tyrosine and serine/threonine kinase 626 898 IPR001245 GO:0004672|GO:0006468
Lapu7g00119 969 FunFam receptor protein kinase TMK1 701 918 - -
Lapu7g00119 969 SMART serkin_6 623 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00119 969 Pfam Leucine rich repeat 243 301 IPR001611 GO:0005515
Lapu7g00119 969 Gene3D Ribonuclease Inhibitor 26 327 IPR032675 -
Lapu7g00119 969 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Lapu7g00119 969 Pfam Leucine rich repeat N-terminal domain 334 369 IPR013210 -
Lapu7g00119 969 SUPERFAMILY Protein kinase-like (PK-like) 602 899 IPR011009 -
Lapu7g00119 969 Gene3D Transferase(Phosphotransferase) domain 1 701 919 - -
Lapu7g00119 969 MobiDBLite consensus disorder prediction 456 514 - -
Lapu7g00119 969 Gene3D Phosphorylase Kinase; domain 1 587 700 - -
Lapu7g00119 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Lapu7g00119 969 FunFam receptor protein kinase TMK1 585 700 - -
Lapu7g00119 969 PANTHER OSJNBA0070M12.3 PROTEIN 11 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00119 Lapu-Chr7 1283705 1288007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00119 60 899 Receptor kinase-like Gene Family AT5G65700 30.130 8.84e-79 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lapu7g00119 PK_Tyr_Ser-Thr 8.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00119 - - gmx:100781857 1543.87