Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00113 ATGTCGCAGCTAAACGGCGCGTACTACGGTCCCCCCATTCCGCCGCCCAAGTCCTACCGCCGCCCGTCCCGCGGCGGAGGTGGGTGCGGGTGCCTCAGCTGCTGCTGCGGGTGCATCTTCAACTGCATCCTGAGCCTCATCTGCAAGATCCTCACCACCGTGCTCATCATCGCCGCCGTAGTCGCGTTCCTCTTCTGGCTCATCGTGCGACCCAACGTCCTCAAATTCCACGTCAGCGACGCCTCCCTCACGCGCTTCACGTTCTCCAACGACACGCTCCACTACGACCTCGCCCTCAACGTCTCCATCCGCAATCCCAACCGCAGAGTCGGCGTGTACTACGACCAAATCGAAGCGCTCGCTTTGTACGAGGATGTCCGATTTGCGTCCCAGACCTTGGGGCCCTTCTTCCAGCACACTAAAAACACCACCTTCATCAGCCCCCTCTTCAAGGGCCAGCACGTGACGCCACTCGCCGCCGACCAGGCTTCCCAATTCCACGAGGAAAACGGCTCCGGGGTTTTCTCCATCGACGTGAAGCTCTTCATGACGGTTCGATTCAAGTTCTTGTTCTTCAAGAGCCACACCGTGAGACCCAAGATTCGGTGTGAGTTGCACGTGCCGCTGAAATCGCGTAACGCAACGACCTCCCCCGACGCTACGTTTCATGCCACGGAGTGCGATTGGGATTACAAACGGTGGTGGATCCGTTGA 714 0.5938 MSQLNGAYYGPPIPPPKSYRRPSRGGGGCGCLSCCCGCIFNCILSLICKILTTVLIIAAVVAFLFWLIVRPNVLKFHVSDASLTRFTFSNDTLHYDLALNVSIRNPNRRVGVYYDQIEALALYEDVRFASQTLGPFFQHTKNTTFISPLFKGQHVTPLAADQASQFHEENGSGVFSIDVKLFMTVRFKFLFFKSHTVRPKIRCELHVPLKSRNATTSPDATFHATECDWDYKRWWIR* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00113 237 Pfam Late embryogenesis abundant protein 100 203 IPR004864 -
Lapu7g00113 237 PANTHER OS05G0367900 PROTEIN 45 213 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00113 Lapu-Chr7 1223540 1224331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00113 68 215 SNARE and Associated Proteins AT1G32270 37.748 3.37e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00113 - - pvu:PHAVU_007G268900g 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00113 7 1223540 1224331 Lapu7g00113 7 1223540 1224331 ECH
Lapu6g00694 6 7258936 7260000 Lapu7g00113 7 1223540 1224331 PCT