Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00096 ATGTTGTTCACAATGCTTATATGTCATCACTCATTGCAGGATGAGATTTCAAGCCCAATCAGTGCTCGAATTTTCGAACTTTGTGACCCTGTTTTTTTCCCAGACACACTGCAAAATTCTGAGGTTACCTCCAGCTCAAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATGTAGTAGACAACAAGATCAATATCAATAGCAACCTAGTCACCACCTCATCTAGTACTACCACAGCCAGCACCAATACCAACAACAACATCAACAACAACACAACAAACAGCAATAACCTGTCTATCTTCTTTGACTCACAAGATGATATTGACAATGACATATCAGCCTCCATAGATTTCTCATCATCTCCATCCTTTGCTGTTCCACCACTTCTCCCAATCACAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACAGGTGCATATATCAGCAGCAGGTTCAGTATTGAAGGGCCTCTCTCAGTACCCTACTGACCCTGTGGTTGCACCTCTTATTGGGGCTCCATTAGCATCAGTTTTTGATGATGATTGCATCTCTTCCATCCCTTCTTATGTGCCTCTCAACCCTTCATCTCCCTCTTGCTCTTATCTCAGTCCTGGCATAGGAGCGTACATGCCTCCTCCTGGTTCCCTTACCACTGCCTTATCTGCCGACAGTTCTGGATTGTTTGGTGGGAACATTCTACTGGGGTCCGAACTGCAGGCACAAGAACTGGACTACCAGGGAGAAAATGGCGGAATATATTGTACGGATTCGATTCAGAGGGTGTTTAACCCTCCAGACCTTCAGGCACTTGGTACTGAGAGTCAGAAACTTGCATCTGGAGCTGGGGGCTCTGCCACTTTGGCACCAGAAATTTCACACTTGGAGGACTCTACCTTGAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGGAATGAAAGAAACTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCAGGCCCCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGGGCCACAGACAAGGAAGTAGCAACCATGAAGAAGATGATGAAGAGATAATTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGGGTGAACTCTTTCAAATGCAACTATTCCATACAGTCCTTGATTTGA 1251 0.442 MLFTMLICHHSLQDEISSPISARIFELCDPVFFPDTLQNSEVTSSSNCCHEEKSSYATTISPPLDVVDNKININSNLVTTSSSTTTASTNTNNNINNNTTNSNNLSIFFDSQDDIDNDISASIDFSSSPSFAVPPLLPITTQQDQFDFSSAQPQVHISAAGSVLKGLSQYPTDPVVAPLIGAPLASVFDDDCISSIPSYVPLNPSSPSCSYLSPGIGAYMPPPGSLTTALSADSSGLFGGNILLGSELQAQELDYQGENGGIYCTDSIQRVFNPPDLQALGTESQKLASGAGGSATLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGEGHRQGSSNHEEDDEEIIVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00096 416 MobiDBLite consensus disorder prediction 355 380 - -
Lapu7g00096 416 Pfam CCT motif 319 361 IPR010402 GO:0005515
Lapu7g00096 416 ProSiteProfiles CCT domain profile. 319 361 IPR010402 GO:0005515
Lapu7g00096 416 MobiDBLite consensus disorder prediction 355 379 - -
Lapu7g00096 416 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 132 377 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00096 Lapu-Chr7 1009428 1012184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00096 298 366 C2C2-CO-like Transcription Factor Family AT5G24930 40.580 2.32e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu7g00096 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00096 - - gmx:100793417 635.565