Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00084 ATGTTAAAGTCAGTGTCATTTGGACTGTTGTTAACTTGCATTCTGCTGCTCACTTGTGTGTGCGCAACAGATAATGGGCTTCAAAGATGTAACTGCGATGATGATTCCAGCCCCTGGACTATTGAGACGATTCTGGAGTGCCAAAGGGTTGGTGATTTTCTGATTGCTGTGGCCTACTTCTCCATCCCCGTTGAGCTGCTTTACTTTGTTAGTTGCTCAAACTTCCCATTCAAATGGGTCCTCTTTCAGTTCATTGCTTTCATTGTACTTTGTGGAATGACACATCTGCTGAATGGGTGGACTTATGGTCCCCACACTTTTCAACTCATGGTGGCAATCACTGTATTCAAAACTCTCACTGCCTTGGTGTCATGTGCCACTGCCCTAACTCTCCTCACTCTGATCCCTCTGCTGTTGAAAGTGAAGGTTAGGGAATTCATGCTGAAGAAAAAGACCTGGGATCTTGGGAGGGAAGTTGGGTTCATAATGAAACAGAAGGAGGCTTCAATGCATGTAAGAATGCTTACTCAAGAGATTCGAAAGTCGTTGGACAGGCACAAGATTCTGTATACCACCCTGGTTGAGCTATCTAAGACACTTGGTTTGCAAAACTGTGCAATTTGGATGCCAAATGATGAGAAAACTGAGATGAACCTCACTCATGAATTGAATGGGAGGAATACCAACTGTTCTGTTCCCATAACAGATCCAGATGTTGCGAGAATTAAGGAGAGTGATGAAGTAAACGTGATTGATTCTGATTCAGTACTTGCCACTGCCAGCAGTGGAGATTCTGGTGTGGCAGGACCAGTTGCTGCAATTCGAATGCCAATGCTTCGGGTTAGCAATTTCAAAGGGGGGACGCCGGAGCTAAGACAGACGTGTTATACCGTATTGGTTTTGATTCTTCCTGTCACCGAGCCTAAATCATGGAGCACCCAAGAGCTGGAGATCATTAAGGTGGTTGCCGATCAGGTGGCTGTGGCTCTGTCTCATGCTGCAATTCTTGAAGAGTCTCATCTGATGAGGGAGAAGTTGGAGGTACAAAATCGAGCATTGCAAGTGGAAAAGATTAATGCTATGAGGGCGAACCAGGCTAGAGCAGCATTTCAGAAGGTCATGAGTAATGGAATGGGAAGGCCTATGCACTCAATTTTGGGGCTGCTTTCAGTGATGCAAGAAGAGAAGTTAAAGCGTGAACAGAAACTCGTTGTGGATTCTATGTTCAGAACCAGCACTGTTATGTCAAACTTGCTAAATGATGCCATGGACTGCTCAGCAAGGGACGATGGAAGATTCCCTTTGGAGATGAAGCCTTTTGGGTTGCATGCTATGGTGAAGGAGACAGCTGGCATTGCCAGGTTCATGTGTATTCATAGGGGCCTTGGCTTTGTTGTAGATGCTGATAAGTCTTTGCCAGACAATGTTATAGGTGATGAAAAGAGGGTCTTCCAAGTGCTTTTGCATATGGTTGGGAGTGCAGTAAATGGTAACCAAGGAGGAGGGGTTCTTGTGCTCCGAGTTTATGCAGAAACTGGAAGCCAAGGGAGGAATGACCAGGGATGGACAAACTGGAGACCAAGCTCTTCAAGTGGGGATGTAAATATCAGATTTGAGATAGGGATCAATATTGGTGATTCTGAATTGGAGAATTCAGTTCCTTCAGGGCAGCTTCCAGGTACAATGCGTGCTAGTGATAGGGTCGAGGAAAGATTGAGCTTCAGCATTTGCAAGAGGATAATCCAGTTGATGCAAGGGAACATATGGTTTGTACCAAACGCTCAAGGTCATCCTCAGGTCATGGCCATTTCTCTAAGGTTTCAACTGCAGCGATCTATTGCTGTATCCATCTCTGAAACTGGGGAAAGTTCTGAGCCATCAAGTTCCAATTCTTTTTTCAGAGGTCTGCAAGTGTTGTTGGTGGACAGCGACGATGTAAATAGAGCAGTGACCCAGAAGTTGCTTCATAAACTAGGCTGCTCTGTCACTTCTGTTTCTTCAGGATTTGAATGCCTCAGTGTCACTGGACCTGGTGGATGCTCTTTTCAAGTCATTCTTTTGGATCTTCACATGCCTGGGCTTGATGGATTTGAAGTTGCATCTAGGATTCGCAAGTTTGGAAGCCGAAACTGGCCAGTGATTGTTGCATTGACTGCAAGCACAGAAGATTTATGGGAAAAATGCATGCAAATTGGCATGAATGGAATCATAAGAAAGCCAATTTTGTTGCATGGAATTGCCAGTGAACTCAGAAGAATCCTGCTGCAGGGAAATACTGTCATGTGA 2286 0.4497 MLKSVSFGLLLTCILLLTCVCATDNGLQRCNCDDDSSPWTIETILECQRVGDFLIAVAYFSIPVELLYFVSCSNFPFKWVLFQFIAFIVLCGMTHLLNGWTYGPHTFQLMVAITVFKTLTALVSCATALTLLTLIPLLLKVKVREFMLKKKTWDLGREVGFIMKQKEASMHVRMLTQEIRKSLDRHKILYTTLVELSKTLGLQNCAIWMPNDEKTEMNLTHELNGRNTNCSVPITDPDVARIKESDEVNVIDSDSVLATASSGDSGVAGPVAAIRMPMLRVSNFKGGTPELRQTCYTVLVLILPVTEPKSWSTQELEIIKVVADQVAVALSHAAILEESHLMREKLEVQNRALQVEKINAMRANQARAAFQKVMSNGMGRPMHSILGLLSVMQEEKLKREQKLVVDSMFRTSTVMSNLLNDAMDCSARDDGRFPLEMKPFGLHAMVKETAGIARFMCIHRGLGFVVDADKSLPDNVIGDEKRVFQVLLHMVGSAVNGNQGGGVLVLRVYAETGSQGRNDQGWTNWRPSSSSGDVNIRFEIGINIGDSELENSVPSGQLPGTMRASDRVEERLSFSICKRIIQLMQGNIWFVPNAQGHPQVMAISLRFQLQRSIAVSISETGESSEPSSSNSFFRGLQVLLVDSDDVNRAVTQKLLHKLGCSVTSVSSGFECLSVTGPGGCSFQVILLDLHMPGLDGFEVASRIRKFGSRNWPVIVALTASTEDLWEKCMQIGMNGIIRKPILLHGIASELRRILLQGNTVM* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00084 761 SMART gaf_1 184 340 IPR003018 GO:0005515
Lapu7g00084 761 Gene3D - 163 331 IPR029016 -
Lapu7g00084 761 CDD HATPase_ETR2_ERS2-EIN4-like 472 605 - -
Lapu7g00084 761 Pfam Response regulator receiver domain 638 742 IPR001789 GO:0000160
Lapu7g00084 761 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 27 756 - -
Lapu7g00084 761 Gene3D - 430 613 IPR036890 -
Lapu7g00084 761 CDD REC_ETR-like 636 750 - -
Lapu7g00084 761 ProSiteProfiles Response regulatory domain profile. 637 754 IPR001789 GO:0000160
Lapu7g00084 761 SMART REC_2 636 754 IPR001789 GO:0000160
Lapu7g00084 761 SUPERFAMILY GAF domain-like 187 333 - -
Lapu7g00084 761 Pfam GAF domain 184 330 IPR003018 GO:0005515
Lapu7g00084 761 PIRSF Ethylen_sen_hybr_HK 1 761 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Lapu7g00084 761 FunFam Ethylene receptor 634 757 - -
Lapu7g00084 761 Gene3D - 332 429 - -
Lapu7g00084 761 SUPERFAMILY CheY-like 633 754 IPR011006 -
Lapu7g00084 761 Gene3D - 616 753 - -
Lapu7g00084 761 FunFam Ethylene receptor 4 333 427 - -
Lapu7g00084 761 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 595 IPR036890 -
Lapu7g00084 761 Coils Coil 336 363 - -
Lapu7g00084 761 CDD HisKA 364 424 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00084 Lapu-Chr7 882361 886797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00084 24 754 Miscellaneous Gene Families AT3G04580 54.913 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu7g00084 GAF 4e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00084 K14509 - gmx:100802948 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00084 7 882361 886797 Lapu7g00084 7 882361 886797 ECH
Lapu6g02001 6 19804906 19810389 Lapu7g00084 7 882361 886797 ECH