Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00083 ATGGACCTTTCCATCAACGAAAGAACCTTTGGCAGAGAAAGAGAAGATGAAGAGGAAGAAGATAGAGACAACGGTGACGAACCCAAGGAAGGTGCAGTTGAGGTTGGAACTCGCAGGCCTAGAGGGAGACCACCCGGCTCCAAAAACAAGCCCAAACCACCCATCTTTGTCACCAGGGACAGCCCAAACTCCCTCAGAAGCCATGTCATGGAGGTTGCCGGTGGCGCTGACGTCGCCGAAAGCGTCGCACAGTTCGCTCGCCGCCGCCAGCGTGGGGTATGTGTCCTCAGTGGGAGCGGTTCCGTGGCCAACGTCACCCTCCGGCAACCAGCAGCGCCGGGAGCGGTTGTGGCACTACATGGAAGGTTTGAGATTTTGTCCCTAACCGGAGCGTTTCTACCTGGCCCTGCTCCGCCAGGTGCTACCGGACTTACCGTGTATCTGGCCGGAGGACAAGGGCAGGTAGTTGGAGGGAGCGTCGTGGGCCCTCTTGTGGCAGCCGGACCAGTTATGGTTATAGCTGCCACTTTTGCTAATGCTACCTATGAGAGGTTGCCACTGGAAGAGGAGGACGAGGATGGTGGTGGTGGCAGTGTCCAAGGAGGAAGTACTCTGGGAGGGTCACCTCCTGGAATTGGTAGCAGTGGTGGTGGTGGTGACGGCGTGAGTGGTGGGAGCCACTTGCCTGGTGGGATTCCTGATCCTTCTTCTTTGCCTTTGTATAACCTTCCACCAAATCTTCTATCCAATGGAGGAGGCCAAGTGGGGCATGAGGCTTTTGCTTGGGCTCATGGCCATGGAAGACCACCTTACTGA 816 0.5686 MDLSINERTFGREREDEEEEDRDNGDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGPLVAAGPVMVIAATFANATYERLPLEEEDEDGGGGSVQGGSTLGGSPPGIGSSGGGGDGVSGGSHLPGGIPDPSSLPLYNLPPNLLSNGGGQVGHEAFAWAHGHGRPPY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00083 271 MobiDBLite consensus disorder prediction 1 63 - -
Lapu7g00083 271 MobiDBLite consensus disorder prediction 1 15 - -
Lapu7g00083 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 265 IPR014476 GO:0003680
Lapu7g00083 271 FunFam AT-hook motif nuclear-localized protein 65 192 - -
Lapu7g00083 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 66 178 IPR005175 -
Lapu7g00083 271 MobiDBLite consensus disorder prediction 188 237 - -
Lapu7g00083 271 PIRSF ESCAROLA 3 271 IPR014476 GO:0003680
Lapu7g00083 271 Gene3D - 65 193 - -
Lapu7g00083 271 CDD DUF296 66 149 IPR005175 -
Lapu7g00083 271 ProSiteProfiles PPC domain profile profile. 62 202 IPR005175 -
Lapu7g00083 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 62 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00083 Lapu-Chr7 863675 864589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00083 28 271 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 68.293 1.27e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00083 - - gmx:102663643 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00083 7 863675 864589 Lapu7g00083 7 863675 864589 ECH