Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00073 ATGGATTCCTTAGATGACAGCGGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCCCCTGATTTCCTTTGGCCCAATCACATTGCAAGTGTGAGCACTGAAATTGACATTCCGGGTGATGTTGTTGCTTGTGAAGAAGAGAACATCAAGAAGAGGGGGCGTACTGATTCATGCTGTAAGGCCGGATCAAAAGCATGCCGTGAGAAATTGCGGAGGGAGAGACTCAATGAAAGGTTCTGTGACCTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAGGACAGATAAACCATCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAAACCGAAGCTCAGGAACTCAAAACAAAAAATGAAAAACTATTAGAGGAAATAAAATGTTTAAAGGCAGAGAAAAACGAGCTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAGAGGATTGAGAAGCAGCTGAAATCCTTGCCCATTGCACCAGCAGGGTTTATGGCACCCCCTGTAGCTTCTGCAGCTGCATATCAAGCAGGGATGAACAAGATGGCTGTTTATCCAAATTATGGCTACATCCCAATGTGGCAATATCTTCCTCAATCTGCCAGAGACACATCCCAAGATCACGAGCTTAGGCCTCCAGCTGCATAG 663 0.451 MDSLDDSGCWDFLDYSFIDQAPPDFLWPNHIASVSTEIDIPGDVVACEEENIKKRGRTDSCCKAGSKACREKLRRERLNERFCDLSSVLEPGRPVRTDKPSILDDAIRVLSQLKTEAQELKTKNEKLLEEIKCLKAEKNELREEKLVLKADKERIEKQLKSLPIAPAGFMAPPVASAAAYQAGMNKMAVYPNYGYIPMWQYLPQSARDTSQDHELRPPAA* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00073 220 Gene3D - 65 146 IPR036638 GO:0046983
Lapu7g00073 220 SMART finulus 68 119 IPR011598 GO:0046983
Lapu7g00073 220 CDD bHLH_AtILR3_like 67 142 - -
Lapu7g00073 220 Pfam Helix-loop-helix DNA-binding domain 66 113 IPR011598 GO:0046983
Lapu7g00073 220 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 113 IPR011598 GO:0046983
Lapu7g00073 220 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 140 IPR036638 GO:0046983
Lapu7g00073 220 FunFam Transcription factor bHLH104 65 146 - -
Lapu7g00073 220 Coils Coil 103 158 - -
Lapu7g00073 220 PANTHER BHLH TRANSCRIPTION FACTOR 7 220 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00073 Lapu-Chr7 782868 786588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00073 42 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 63.784 6.49e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g00073 HLH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00073 - - gmx:100787583 375.555