Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00070 ATGAATGAAGAAGGTTCAAAGGGAAAGGCCAAGGATGAAGAAGAGCATGTGAAGTACAGAGGGGTCCGCAGGAGGCCATGGGGAAAATATGCAGCAGAGATTCGTGACTCAATGAGACATGGTCAAAGGTTGTGGTTGGGAACATTCACCACTGCAGAGGAAGCTGCTAAAGCCTATGACAGAGCTGCATATGCCATGAGGGGTCCCTTTGCAGTCCTCAATTTCCCTGATGAATACCCTCCTTCTGCAGCAGCTTCTTCTTCATCATCATCTTCTTCTTCAGCTTTTTCATCTGTACCTTCTACAAGCCATGTGGAAGGAAGAGGAAGAGGAAGAGGGAGTGAGGAAGCAAGTCAAGTGTTTGAGTTTGAGTACTTGGATGACAAATTGTTGGAGGAGCTTCTTGGTTATGAGGACAAAAATAAACATGGCAAGTGA 438 0.4589 MNEEGSKGKAKDEEEHVKYRGVRRRPWGKYAAEIRDSMRHGQRLWLGTFTTAEEAAKAYDRAAYAMRGPFAVLNFPDEYPPSAAASSSSSSSSSAFSSVPSTSHVEGRGRGRGSEEASQVFEFEYLDDKLLEELLGYEDKNKHGK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00070 145 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Lapu7g00070 145 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Lapu7g00070 145 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Lapu7g00070 145 MobiDBLite consensus disorder prediction 81 116 - -
Lapu7g00070 145 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Lapu7g00070 145 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Lapu7g00070 145 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Lapu7g00070 145 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Lapu7g00070 145 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Lapu7g00070 145 PANTHER DNA-BINDING DOMAIN 11 139 IPR044808 GO:0003700|GO:0009873
Lapu7g00070 145 MobiDBLite consensus disorder prediction 81 104 - -
Lapu7g00070 145 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00070 Lapu-Chr7 762830 763321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00070 13 142 AP2-EREBP Transcription Factor Family AT3G23230 51.538 1.00e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g00070 AP2 4.1e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00070 7 762830 763321 Lapu7g00070 7 762830 763321 ECH