Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00069 ATGGAGAAGATCCAAAAGGGGAAGCACAACAAGTTGAAGGAGAGAAGGGTGGCGGAAAAGGTCCGGTACCGCGGCGTCCGACGGCGGCCGTGGGGGAAGTATGCGGCGGAGATAAGAGACCCATCTAAGCAAGGGTCAAGGTTGTGGTTAGGAACCTTTGAGACAGCCGAAGAGGCAGCTAGGGCATATGATCATGCAGCCTTTAGCATGAGGGGTCGTGTTGCAATTTTGAATTTTCCTAATGAGTACCATTCTCATGTTAGGGTTTATCCTCAAAATTTAGCATCACCCTCGCCATCATCATCACCCTCCACCATTGCTGATAAAAAGAAAAAAAAACCCTCCACCATTACTCATTCAAATGGTGGACCACAAAGGCAAGTTTTTGAGTTTGAGTATTTGGATGATAAGGTGTTGGAGGAACTTCTTGAGTTTGAACAGAAGAAGACTAGGCAAGGTTGA 462 0.4675 MEKIQKGKHNKLKERRVAEKVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFETAEEAARAYDHAAFSMRGRVAILNFPNEYHSHVRVYPQNLASPSPSSSPSTIADKKKKKPSTITHSNGGPQRQVFEFEYLDDKVLEELLEFEQKKTRQG* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00069 153 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Lapu7g00069 153 ProSiteProfiles AP2/ERF domain profile. 22 80 IPR001471 GO:0003700|GO:0006355
Lapu7g00069 153 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Lapu7g00069 153 PANTHER DNA-BINDING DOMAIN 15 149 IPR044808 GO:0003700|GO:0009873
Lapu7g00069 153 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Lapu7g00069 153 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Lapu7g00069 153 FunFam Ethylene-responsive transcription factor 2 21 81 - -
Lapu7g00069 153 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
Lapu7g00069 153 Gene3D AP2/ERF domain 21 82 IPR036955 GO:0003700|GO:0006355
Lapu7g00069 153 MobiDBLite consensus disorder prediction 92 124 - -
Lapu7g00069 153 SMART rav1_2 22 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00069 Lapu-Chr7 750199 750660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00069 20 149 AP2-EREBP Transcription Factor Family AT3G23230 59.231 1.60e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g00069 AP2 4.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00069 - - gmx:100814296 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00069 7 750199 750660 Lapu7g00069 7 750199 750660 ECH