Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00068 ATGGATTGTTCTTCTTCCATTCTCTGTTCATCAAACTCGTCAGAATCCTCAGTGGGATCCCCTCATCACCATCTTCCCTTCAACGAAAACGATCCTGAAGACATGCTGCTCTATGGCATGATCACCTCGTACCAAGAGAGAACCAACTCATGCAAACTTATCATCAAAGAAGAGGAGGTGAATTCCCAGCAATTAAACAACACTAACAGTAAAAGTTTTCGCGGTGTGCGGAGGCGACCGTGGGGGAAGTTTGCGGCGGAGATAAGAGACTCTACCCGACATGGCATAAGAGTGTGGCTTGGTACATTCGACAGCGCGGAGGCGGCGGCGCTGGCTTATGACCAAGCCGCCTTTGCCATGCGGGGTTCTGCTGCAGTGCTCAACTTCCCCGTGGAGAAGGTGAAGGAGTCACTGAGGGACATGGATTGCTGTCTCTCTCAGCTTCAAGGCTGCTCTCCCGTTGTGGCCTTGAAGAGGAGACATTCCTTGGGACGTAAAATGGCTGCGAAAAAGAAGAAGGAAGAGACTCAAGAGAGTGATGACGGTGGTGGTGTTAGGGTAGAGAACTTGGTTGTGTTTGAAGACCTGGGGGAAGAATATCTCGAACATTTGTTGATGATGTCCTCTGCTGATGCCAGATGTACTTGGTGA 651 0.5008 MDCSSSILCSSNSSESSVGSPHHHLPFNENDPEDMLLYGMITSYQERTNSCKLIIKEEEVNSQQLNNTNSKSFRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFAMRGSAAVLNFPVEKVKESLRDMDCCLSQLQGCSPVVALKRRHSLGRKMAAKKKKEETQESDDGGGVRVENLVVFEDLGEEYLEHLLMMSSADARCTW* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00068 216 PRINTS Ethylene responsive element binding protein signature 112 132 IPR001471 GO:0003700|GO:0006355
Lapu7g00068 216 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Lapu7g00068 216 MobiDBLite consensus disorder prediction 1 26 - -
Lapu7g00068 216 CDD AP2 71 131 IPR001471 GO:0003700|GO:0006355
Lapu7g00068 216 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Lapu7g00068 216 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
Lapu7g00068 216 PANTHER DNA-BINDING DOMAIN 50 205 IPR044808 GO:0003700|GO:0009873
Lapu7g00068 216 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Lapu7g00068 216 FunFam Ethylene-responsive transcription factor 2 71 132 - -
Lapu7g00068 216 MobiDBLite consensus disorder prediction 1 23 - -
Lapu7g00068 216 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Lapu7g00068 216 Gene3D AP2/ERF domain 71 132 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00068 Lapu-Chr7 731100 731750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00068 25 216 AP2-EREBP Transcription Factor Family AT3G23240 58.376 4.57e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g00068 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00068 K14516 - gmx:100780576 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00755 7 8916875 8917510 Lapu7g00068 7 731100 731750 ECH
Lapu7g00068 7 731100 731750 Lapu7g00068 7 731100 731750 ECH