Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00041 ATGCCTTTCAAGAGGTACGTTGAAATTGGAAGGGTTGCTCAAATCAACTACGGCAAAGAGTATGGGAGGCTAGTAGTCATTGTCGATGTCATTGACCAGAACAGAGCTCTTGTGGACGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCACTCACTGACATTAAGATTGATATCAAGAGGGTCCCCAAGAAGAAGGATCTCATCCAAGCCATGGAGGCTGCTGATGTTAAGAACAGGTGGGAGAAGAGTTCATGGGGCAGAAAACTGATTGTGCAGAAGAGAAGAGCATCCCTCAATGACTTTGACAGGTTCAAGATTATGTTGGCAAAGATCAAGAGGGCCGCAGTTGTTAGGCAAGAGCTTGCTAAGCTGAAAAAGAGTGCATCTTAG 402 0.4652 MPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKIDIKRVPKKKDLIQAMEAADVKNRWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAAVVRQELAKLKKSAS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00041 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Lapu7g00041 133 FunFam 60S ribosomal protein L14-1 1 84 - -
Lapu7g00041 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 131 IPR039660 GO:0003723|GO:0003735
Lapu7g00041 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Lapu7g00041 133 Gene3D - 1 84 IPR014722 -
Lapu7g00041 133 Gene3D - 92 127 - -
Lapu7g00041 133 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00041 Lapu-Chr7 457214 460826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00041 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 82.707 1.34e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00041 K02875 - gmx:100817659 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00041 7 457214 460826 Lapu7g00041 7 457214 460826 ECH