Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00040 ATGATTCCAATATCACATGGCCATCATGTGGTGGAGCATCATGTGATCAAAGGTGGTTCTGATGACTCAGAGTTTGATTCAGTTGTGATACAGAGGGAGCAGATGGATCACACAGAAATGTGGTATTTTGGAATCTTTGATGCTGTAGTTGCAGATGGAGTTACCAAGTATATGCAATCTCATTTCTTTGGCAAGAAGCTCAAAGAGTGTCATATGAGGAGAAAAGGCAAAGAAACACTGAAGAGAGCTTACCTAGGTGTAAGAACAAAGATCAGAGAGGCACTGAAGCCAGAGGAGGAGATATGCAGAATAGGTTCAACATCAGTGATGGTGATAAATGGAGAAAAGCTTGTGATAGCCAACATGGGAGATTACAGAACTGTTTTGTGTAGAGATGGTGTTGCTTATCAAACAACTGGAAGACACAATCTATCAGCCAAGAGGAATTGGTATAGCAGACTCTTTTCAGTACGCATGATAGCTTGTGGATCAGGCAACACAACAGGTACAAAGCATTCCAAAGGCTCAGAACTTGTGGTAGGAGGTGATAGAATCGACTCTGACACTGAATTTTTGATCCTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTCATAAGACACATAGAGGATCCACAAGAAGCAGCAGAATGCTTGGCAAAGGAAGCTTTGATTAGGATGAGCAGAAGCAAAATTGCATGCTTAGTCATTCGCTTTGACTGA 741 0.4211 MIPISHGHHVVEHHVIKGGSDDSEFDSVVIQREQMDHTEMWYFGIFDAVVADGVTKYMQSHFFGKKLKECHMRRKGKETLKRAYLGVRTKIREALKPEEEICRIGSTSVMVINGEKLVIANMGDYRTVLCRDGVAYQTTGRHNLSAKRNWYSRLFSVRMIACGSGNTTGTKHSKGSELVVGGDRIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMSRSKIACLVIRFD* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00040 246 ProSiteProfiles PPM-type phosphatase domain profile. 22 245 IPR001932 -
Lapu7g00040 246 Pfam Protein phosphatase 2C 184 236 IPR001932 -
Lapu7g00040 246 Pfam Protein phosphatase 2C 39 144 IPR001932 -
Lapu7g00040 246 PANTHER PROTEIN PHOSPHATASE 26 245 IPR015655 GO:0004722|GO:0006470
Lapu7g00040 246 SUPERFAMILY PP2C-like 26 246 IPR036457 -
Lapu7g00040 246 SMART PP2C_4 3 243 IPR001932 -
Lapu7g00040 246 CDD PP2Cc 26 245 IPR001932 -
Lapu7g00040 246 Gene3D - 11 246 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00040 Lapu-Chr7 450061 452086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00040 1 245 PP2C-type Phosphatase Gene Family AT3G23360 46.748 1.21e-70 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00040 K19704 - gmx:100794054 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00040 7 450061 452086 Lapu7g00040 7 450061 452086 ECH