Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00037 ATGGGGAGGACAGGCAAATGGCTTAGGAACTTGTTGACAGGGAAGAGAGACAGAGAAAAGGAGAAGGAAAAATGTAGTACCAACCTGTGTTTGTTAAATGGCACAACAGAGAATCCAACCACTCCTGCTTCAACAACAACAACAACCCCCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCTTCCAGGGAATTGAATCTTGCAGAATCTGGTGTCACTACCTCAGTGACAGTGCAAACTGCCACCACAGAGGCTGAGAATGACCAAAGGAAACATGACACGGTGGTGGCTGTGGCTGCTGATGCTGCTATGATCTGCTTCACTCCTGATTCCAATATATCATCAACGAGTATTGAAGAGGCTGCTGCCATTAAAATTCAGTCAGTGTTTCGGTCCTACTTGGCAAGAAAGGCACTGTGTGCTCTTAGAGGACTAGTGAAGTTGCAGGCACTAGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTAAGATGCATGCAAGCTTTGGTCATAGCACAAGCCAGGGCTCGTGCTCAGAGGGCAAGGATCGTGTCAGAAGGAAAGGTTGATCAAAATCTTTCACCCTACAGAATAACAACAGAGGACAACTTCTTCATGCACATGTATAATGAAATAGAAAGTGGTCTAGAATTGGAAGAGGATGCCAAGATTGTTGAGATGGCTGTTAGTGAATCCAAAGGTAACTCCAAAGGCAGAAACAGCACTGCGAATCGCGAACTTTCTGATCATAGATTTTCTGCATATTATTCATCAAATGGTTCATACTCAAAGGAGGAAAACTGCAATGCATCACCTGCACCATCAACACTGACAGAGTTGAGTCCAAGAGCATACAGTGGTCATTTTGAGGAGTGTTCATTCAGCACAGCACAAAGTAGTCCCTATTACTACTCAGCAGTGTCAAGAGTGGAGAACACAAAGCTAGCTTTTGCCTTCCCTAAAGCAGCCTACACAGAACCCATGTCCTATGACCACCCTTTGTTTCCAAACTACATGGCCAACACAGAATCATCAAGGGCCAAAGCCAGATCGCAGAGTGCACCAAAGGCGAGGCCCGATTCGTTCGAGAGGCAGCCAAGCCGGCGAAGGGCTTCAATGGAAGGGAGAAATGTCCCAAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTCACTGCCCAAAACTACCAATATCCTTGGTCTGTAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCCACAAGTACAGTGCTCACAAACTCTAATTACTACTGCACTTGA 1302 0.4647 MGRTGKWLRNLLTGKRDREKEKEKCSTNLCLLNGTTENPTTPASTTTTTPKEKRRWSFRRSSASRELNLAESGVTTSVTVQTATTEAENDQRKHDTVVAVAADAAMICFTPDSNISSTSIEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQARETLRCMQALVIAQARARAQRARIVSEGKVDQNLSPYRITTEDNFFMHMYNEIESGLELEEDAKIVEMAVSESKGNSKGRNSTANRELSDHRFSAYYSSNGSYSKEENCNASPAPSTLTELSPRAYSGHFEECSFSTAQSSPYYYSAVSRVENTKLAFAFPKAAYTEPMSYDHPLFPNYMANTESSRAKARSQSAPKARPDSFERQPSRRRASMEGRNVPRPVRMQRSSSHVGVTAQNYQYPWSVKLDRSIVSECGSTSTVLTNSNYYCT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00037 433 SMART iq_5 143 164 IPR000048 GO:0005515
Lapu7g00037 433 SMART iq_5 120 142 IPR000048 GO:0005515
Lapu7g00037 433 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Lapu7g00037 433 Gene3D - 120 168 - -
Lapu7g00037 433 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Lapu7g00037 433 MobiDBLite consensus disorder prediction 365 380 - -
Lapu7g00037 433 MobiDBLite consensus disorder prediction 33 53 - -
Lapu7g00037 433 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Lapu7g00037 433 Pfam IQ calmodulin-binding motif 148 164 IPR000048 GO:0005515
Lapu7g00037 433 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Lapu7g00037 433 MobiDBLite consensus disorder prediction 33 51 - -
Lapu7g00037 433 Pfam Protein of unknown function (DUF4005) 318 380 IPR025064 -
Lapu7g00037 433 MobiDBLite consensus disorder prediction 346 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00037 Lapu-Chr7 417087 419140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00037 1 430 IQD Protein Family AT4G14750 46.102 1.55e-96 295