Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00012 ATGACACCCTTCAAACTGCAACACTTCCTCCTTCTCGTATTCATCTTCTTCTTCCCTTCTTCCCACGCCCAAACGTCGCGTCAGCAGAACAACACGGGCTTCAGGTGCACGGGCACCCGCACGTGCGCCGCCTACGCCTTCTACCGCGCCTCCACTCCCAACTTCCTGGACCTGGCCGCCGTGGGCGACCTCTTCGAGGTGAGCCGCCTCATGATCGCCACGCCGAGCAACATCTCCGCCGTGTCCTCCGCCCTGGTCCAAGACCAGCCCCTCTTCGTCCCCTTGAGCTGCTCCTGCAACCCCGTGAATGCCTCCTTCGGGTCCCTCTCCTACGCCAACATCTCCTACACCATCCAACCTAACGACACCCTCTTCATCGTCTCCACCTTCAAGTTCAACAACCTCACCACCTATCCTTCCGTCGAAACCGTCAACCCCACCTTAGTCGCCACCAACCTCTCCATCGGCCAGGTCACCATCTTCCCTGTCTTCTGCAAATGCCCCGACACCAACAACACCAATTACATGATCTCATACGTTGTGCAACCCGAGGACAACATCTCCTCCATTGCCTCAGCTTTTGGGGTTGAGGAACAAGCTATAATTGACGCCAACAACGAGACACTCTATGATTACGACACCATTTTCATCCCGGTGGCGCAGCTTCCGTCTCTGTCGCAGCCTGCGGTGGCTCCTGCTGCACCGCCAAGCGGGAATGGGAGTGAGAGTGGGAGGGATAGGACGGGGACGGTTAGAGGGTTGGGGATTGGGTTGGGGGTGGTGGGGTTGTTGTTGGTGTTGGTGAGTGGGGTGTGGGTGTGGAGAGAGTTTGTGAGGAAGAAGAGGTTGGGATTGAAGGATGAGGAGGAGGAGGGAGGGAGGAAGAAGGTGTATTCTGGAGGGAAAGAGGGGCAGAAAGGTGGTTTAGATGTGAAACTGATGGCGAATGTGTCGGATTGTTTGGACAAGTATAGGATTTTTGAGGTTGAGGAACTGGTGGCGGCCACCGATGGCTTTGCTGGGAGGTCCTTGATTGAGGGGTCCGTCTACAGAGGGGAGATTGATGGGGAGGTCGTTGCCATCAAGAAGATGAAGTGGAATGCCTATGAGGAACTCAAGATCTTGCAGAAGGTAAACCATGGGAATCTGGTGAAGTTGGAGGGATTCTGCATAGACCCAGAAGAAGCAAACTGCTATCTAGTCTATGAATATGTGGAGAATGGATCTCTATACTCGTGGTTGCATGAGGAGAAAAAGGAAAAGTTGAACTGGAAAACAAGGCTACGAATAGCCATTGACATTGCCAATGGCCTCCAATACATCCACGAGCACACAAGGCCACGAGTTGTGCACAAAGACATCAAGAGCAGCAACATTCTCTTGGACTCCAACATGAGAGCGAAAATTGCAAATTTTGGACTTGCGAAGTCTGGAATGAATGCCATCACCATGCACATTGTGGGAACACAGGGCTACATTGCCCCTGAATACCTGGCTGATGGTGTGGTCTCCACAAAGATGGATGTTTTCTCTTTTGGGGTCGTGTTACTTGAACTAATTTCTGGGAAGGAAGCCATTGATAAGGAGGGAAATATCTTGTGGGCAAGTGCGATCAGAACCTTTGAAGTGGACAGTGAGCAAGAGAAGGGTAGGAGACTTAGGGAATGGTTAGATAAGGATATTTTAAGGGAGACATGCTCAATGGAAAGTTTAATGGGTGTTATCACAGTTGCAATTGCTTGCTTGCATACAGACCAGTCAAAAAGGGCCAGCATATTGGACATTGTATATGCACTATGCAAGAGTGAAGATTTGGGCTTTGACATCTCAGATGATGGGATTGGCTCACCACAGCTGGTGGCTAGGTAG 1869 0.5147 MTPFKLQHFLLLVFIFFFPSSHAQTSRQQNNTGFRCTGTRTCAAYAFYRASTPNFLDLAAVGDLFEVSRLMIATPSNISAVSSALVQDQPLFVPLSCSCNPVNASFGSLSYANISYTIQPNDTLFIVSTFKFNNLTTYPSVETVNPTLVATNLSIGQVTIFPVFCKCPDTNNTNYMISYVVQPEDNISSIASAFGVEEQAIIDANNETLYDYDTIFIPVAQLPSLSQPAVAPAAPPSGNGSESGRDRTGTVRGLGIGLGVVGLLLVLVSGVWVWREFVRKKRLGLKDEEEEGGRKKVYSGGKEGQKGGLDVKLMANVSDCLDKYRIFEVEELVAATDGFAGRSLIEGSVYRGEIDGEVVAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDPEEANCYLVYEYVENGSLYSWLHEEKKEKLNWKTRLRIAIDIANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDKEGNILWASAIRTFEVDSEQEKGRRLREWLDKDILRETCSMESLMGVITVAIACLHTDQSKRASILDIVYALCKSEDLGFDISDDGIGSPQLVAR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00012 622 Pfam LysM domain 179 217 IPR018392 -
Lapu7g00012 622 ProSiteProfiles Protein kinase domain profile. 329 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00012 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Lapu7g00012 622 SUPERFAMILY Protein kinase-like (PK-like) 331 599 IPR011009 -
Lapu7g00012 622 FunFam PTI1-like tyrosine-protein kinase 3 405 604 - -
Lapu7g00012 622 SMART LysM_2 178 218 IPR018392 -
Lapu7g00012 622 SMART LysM_2 115 162 IPR018392 -
Lapu7g00012 622 CDD LysM 177 217 IPR018392 -
Lapu7g00012 622 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 11 601 - -
Lapu7g00012 622 Pfam Protein kinase domain 359 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00012 622 ProSiteProfiles LysM domain profile. 177 223 IPR018392 -
Lapu7g00012 622 Gene3D Phosphorylase Kinase; domain 1 308 404 - -
Lapu7g00012 622 Gene3D LysM domain 176 218 IPR036779 -
Lapu7g00012 622 Gene3D Transferase(Phosphotransferase) domain 1 405 608 - -
Lapu7g00012 622 SMART serkin_6 347 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00012 Lapu-Chr7 194532 198327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00012 9 601 Receptor kinase-like Gene Family AT2G23770 33.810 5.43e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu7g00012 Pkinase 3.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00012 - - gmx:100802872 888.641