Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00007 ATGGATTCATTTTTTCCTGAGAAACTTCTGGGTGAGATTTTCTGGGATCAACCTCTTTTGGCCACTGATCAAAGCGATGCAGTTCAATATTCCCATATCATCAAGGGTGAAGCTTTCCCTCCAGCAACTCAAAGTGCTTTTGTTGAATATAGAGACCTACCAAGAAGAAATAACCCTCTTGATGGGTCAAATTCAGAGAGCATGAGTAAGAGAATGATTGCGTTCTTGAAAAAAAGTTTCCCTGTGGAGAGAAATATCGCAGAAGAGAATGAAAGAGATCGCAGTTTCAGGCACATGATCAATGAGAGAATGAGGAGACAGAGGCAGAGACAGTGTTGCTTGGCCCTGCATTCAATTTTACCACATGGAACCAAAACAGATAATAAATCTGTAATTGAAACAGCAGCAAAGGAGATTGTAAGGCTACAAGGATGCAGAGAAGAGCTGGAGAGGAAAAATTATGAGGCTGAAGTAAATGTTGTGAGGAAGCAGGATGGAGGAAGTAAGATTGCATATTTGAGAGTTATAGATCCCAAGTGTGGAATTGATTCAATGGTTGAGAGGCTGAAGTGGTTGAAAGAGAAAGGAATGGACAGCAGAAGCATGAAATCAAGTTTCTCCCCACAGGAGTTGTTTGCAGTGTTAGAGATAGAGAGTTGTCGGAAAAGAAAAGAAGGATGA 681 0.4097 MDSFFPEKLLGEIFWDQPLLATDQSDAVQYSHIIKGEAFPPATQSAFVEYRDLPRRNNPLDGSNSESMSKRMIAFLKKSFPVERNIAEENERDRSFRHMINERMRRQRQRQCCLALHSILPHGTKTDNKSVIETAAKEIVRLQGCREELERKNYEAEVNVVRKQDGGSKIAYLRVIDPKCGIDSMVERLKWLKEKGMDSRSMKSSFSPQELFAVLEIESCRKRKEG* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00007 226 Coils Coil 132 152 - -
Lapu7g00007 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Lapu7g00007 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 89 154 IPR036638 GO:0046983
Lapu7g00007 226 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 37 221 IPR044658 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00007 1 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 35.169 6.54e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00007 - - pvu:PHAVU_007G280700g 366.311