Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g03025 ATGTTGCATTACGTTGGTCTTAGCATGTTTGAAGTCAAATTTTTGGATACACCATCCACAACAGCAGAGGTGGAGAACTTCTACAAGAATAACTCAATCCCATTGTCGTACACTAAGTTCAAATTAAAAATGTCTGAGTACAACTGCAGAGCAAGCTACCTGGATTTACCCTCTCATTTTGCTGACTTTATTCGACAACATAAATTGCGTGTTGTTACTCTCCATGGAAGACTAACCTCCGTCAAATGTAGAATGTTAATAAGGAACAAACCAAGGAAGTCAACGAAGATTGGCAAAGGTTGGAAGGAGTTCTATGTGGAAAATGAAGTGCATGAAAGTGACATTCTGGAATTCGAATTTCACAGTGAGCAGAACCCATAA 381 0.3885 MLHYVGLSMFEVKFLDTPSTTAEVENFYKNNSIPLSYTKFKLKMSEYNCRASYLDLPSHFADFIRQHKLRVVTLHGRLTSVKCRMLIRNKPRKSTKIGKGWKEFYVENEVHESDILEFEFHSEQNP* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g03025 126 ProSiteProfiles B3 DNA-binding domain profile. 39 126 IPR003340 GO:0003677
Lapu6g03025 126 Pfam B3 DNA binding domain 40 122 IPR003340 GO:0003677
Lapu6g03025 126 Gene3D - 19 126 IPR015300 -
Lapu6g03025 126 SUPERFAMILY DNA-binding pseudobarrel domain 35 122 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lapu6g03025 B3 2.2e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g03025 - K19017 vun:114184752 78.5666