Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g03017 ATGGCGTGGAAGGTGGCGCTAACTGTGCTGTTCTCCCTGGCGCTCTTGTTCTCTCCGTCGCAATGTGCGGTTTTCAGCGTAGATCTAGGTTCCGAATCGTTGAAGGTGGCGGTGGTCAACCTGAAGCCCGGTCAGTCTCCGATCTCGATCGCAATCAACGAGATGTCCAAGCGGAAATCGCCGGCGTTGGTCTCCTTCCACGACGGCCAACGCCTTCTCGGCGAGGAGGCGGCCGGCCTCGCCGCGCGCTACCCGCAGAAGGTCTATTCCCAAACGCGCGACCTCCTCGCCAAGCCCTACGCCTCGGCGCAGAAGATTCTTAACTCAATGTACCTCCCTTTCGACGCGAAGGAAAACTCCCGAGGCGGCATGAGTTTCGTCGCGGACGACGGTAACGAAAACGACAGCGTTTATTCTGCCGAGGAACTTGTCGCCATGGTATTAGGTTACGCGGTGCATTTGGCGGAGTTTCACGCGAAGATTCCGATTAAGGACGCGGTGATCGCGGTGCCGCCTTACATGGGACAGGCCGAGCGGAGAGGGCTGCTTGCTGCGGCGCAGTTGGCGGGGATTAACGTTTTGTCTCTGATAAACGAGCATTCCGGTGCGGCGCTGCAGTATGGGATAGATAAGGACTTCTCGAACGAGACGAGACACGTGATTTTCTATGACATGGGTGCCAGCAGTACCTACGCGGCGCTTGTATACTTCTCGTCGTACAAGGGTAAGGAGTATGGCAAGAGCGTGTCCGTGAACCAGTTTCAGGTGAAGGATGTGCGCTGGAACCCGGAGCTTGGTGGTCAGCACATGGAGTTGCGATTGGTGGAGTATTTTGCGGATCAGTTCAACGCGCAAGTTGGTGGTGGAATCGATGTGAGGAAGTTTCCCAAGGCCATGGCTAAATTGAAGAAACAGGTTAAGCGGACTAAAGAAATTCTTAGTGCGAATACTGCTGCTCCTATTTCCGTTGAATCGCTTCATGATGACGTCGACTTCAGGAGCACTATAACCCGTGAAAAATTTGAAGAGCTCTGTGAGGACATTTGGGAAAAATCACTTTTACCTGTGAAAGAGGTGCTTGAGCATTCTGGCCTTTCATTGGAACAAATATATGCGGTGGAGTTAATTGGAGGTGCCACCAGAGTGCCGAAATTACAGGCTAAACTTCAAGAATTCCTTGGGAGAAAAGAGCTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGGGCAGCTCTGCATGCTGCAAATTTAAGTGATGGAATTAAATTAAACCGCAAACTTGGAATGGTTGATGGTTCCTTGTATGGATTTGTGGTTGAGTTGAATGGTCCTGAACTTTTACAAGATGAAAGCTCTAGGCAGTTACTTGTACCACGAATGAAGAAAGTCCCGAGTAAGATGTTTAGATCCGTTAATCATAACAAAGATTTTGAAGTTTCACTAGCTTATGAAAGTGAGCTTCATTTGCCTCCTGGTGTTACCTCTCCAGAAATTGCTCGATACCAGATATCTGGTTTGACAGATGCAAGTGAGAAATACTCATCTCGGAATCTGTCATCCCCCATCAAGGCAAGCATACATTTTTCTCTTAGTAGAAGTGGAATTCTTTCTCTGGATAGGGCAGATGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCTAAGAAGAATTTGACCGTAGAGAATTCAACCATTTCATCAAATGTTTCAGCTGAATCTGCTGCTGGAAATAGTTCTGAGGGAAACATTGAAAGTATCCAAACTGACAGTGGGATTAGTCAGACATCCAACACGAGTGCAGAGGAGCAAGCTACTGCTGAGCCTGCTATAGAGAAGAAGCTGAAAAAGCGGACCTTTAGGGTGCCATTAAAGATTGTTGAGAAGATAACTGGACTTGGAATGTCCCTGTCACAAGATTTTCTCACTGAAGCCAAAAAGAAATTACAAGTACTAGACCAGAAAGACGCAGACAGAAAAAGAACAGCTGAATTAAAAAATAATTTGGAAGGATATATATACACTACTAAGGAAAAGATTGAAACTCTTGAGGATTTTGACAAAGTTTCTACAAGTGAGGAAAGCCAGTCCTTCATTGAGAAGCTTGATCAGGTGCAAGATTGGTTATATACAGATGGTGAAGATGCCAATGCCACAGAGTTTGAAGAGCGTCTAGATCAGTTAAAAGCTGTTGGAGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGACCAGCAGCAGTTGAGCATGCTCGTAAATATATTGATGAGTTGAAACAGATTGTTGAAGAGTGGAAAGCAAAGAAACCTTGGCTTCCACAAGAACGAGTAGATGAGGTTATAAAAAGTTCTGAAAAACTAAAGAATTGGTTAGACGAAAAAGAAGCTGAGCAAAAGAAGACTTCTGGATTAAGTAAGGCAGCATTTACATCCGAAGAAGTACACTTGAAGGTGCTTGATCTGCAAAACAAGGTTGCCAGTATTAACAGAATTACGAAGCCCAAACCTAAGGTTCAGAAGCCTGTAAAGAATGAAACAGAGAGCAATGAACAGAATACGGATGATCCCAATTCTACCTCTACAGACAGTTCTTCTTCAAGTGATTCATCTGCTAACGATTCAGAAGGGACAAACGAAGAAGAAACTGTTACTGAGCAATCCGAAGGTCATGATGAGCTATGA 2688 0.4565 MAWKVALTVLFSLALLFSPSQCAVFSVDLGSESLKVAVVNLKPGQSPISIAINEMSKRKSPALVSFHDGQRLLGEEAAGLAARYPQKVYSQTRDLLAKPYASAQKILNSMYLPFDAKENSRGGMSFVADDGNENDSVYSAEELVAMVLGYAVHLAEFHAKIPIKDAVIAVPPYMGQAERRGLLAAAQLAGINVLSLINEHSGAALQYGIDKDFSNETRHVIFYDMGASSTYAALVYFSSYKGKEYGKSVSVNQFQVKDVRWNPELGGQHMELRLVEYFADQFNAQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHDDVDFRSTITREKFEELCEDIWEKSLLPVKEVLEHSGLSLEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSLYGFVVELNGPELLQDESSRQLLVPRMKKVPSKMFRSVNHNKDFEVSLAYESELHLPPGVTSPEIARYQISGLTDASEKYSSRNLSSPIKASIHFSLSRSGILSLDRADAVIEITEWVEVPKKNLTVENSTISSNVSAESAAGNSSEGNIESIQTDSGISQTSNTSAEEQATAEPAIEKKLKKRTFRVPLKIVEKITGLGMSLSQDFLTEAKKKLQVLDQKDADRKRTAELKNNLEGYIYTTKEKIETLEDFDKVSTSEESQSFIEKLDQVQDWLYTDGEDANATEFEERLDQLKAVGDPIFFRLKELTARPAAVEHARKYIDELKQIVEEWKAKKPWLPQERVDEVIKSSEKLKNWLDEKEAEQKKTSGLSKAAFTSEEVHLKVLDLQNKVASINRITKPKPKVQKPVKNETESNEQNTDDPNSTSTDSSSSSDSSANDSEGTNEEETVTEQSEGHDEL* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g03017 895 FunFam Heat shock 70 kDa protein 4 266 351 - -
Lapu6g03017 895 SUPERFAMILY Actin-like ATPase domain 24 211 IPR043129 -
Lapu6g03017 895 PANTHER HSC70CB, ISOFORM G-RELATED 23 864 - -
Lapu6g03017 895 FunFam Heat shock 70 kDa protein 17 427 573 - -
Lapu6g03017 895 Gene3D - 27 417 - -
Lapu6g03017 895 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Lapu6g03017 895 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 571 IPR029047 -
Lapu6g03017 895 Pfam Hsp70 protein 25 738 IPR013126 GO:0005524|GO:0140662
Lapu6g03017 895 SUPERFAMILY Actin-like ATPase domain 218 419 IPR043129 -
Lapu6g03017 895 MobiDBLite consensus disorder prediction 567 611 - -
Lapu6g03017 895 MobiDBLite consensus disorder prediction 853 875 - -
Lapu6g03017 895 MobiDBLite consensus disorder prediction 876 895 - -
Lapu6g03017 895 CDD HYOU1-like_NBD 26 417 - -
Lapu6g03017 895 Gene3D Actin; Chain A, domain 4 266 351 - -
Lapu6g03017 895 MobiDBLite consensus disorder prediction 830 895 - -
Lapu6g03017 895 MobiDBLite consensus disorder prediction 567 606 - -
Lapu6g03017 895 PRINTS 70kDa heat shock protein signature 23 36 - -
Lapu6g03017 895 PRINTS 70kDa heat shock protein signature 370 386 - -
Lapu6g03017 895 PRINTS 70kDa heat shock protein signature 55 67 - -
Lapu6g03017 895 PRINTS 70kDa heat shock protein signature 166 186 - -
Lapu6g03017 895 PRINTS 70kDa heat shock protein signature 402 422 - -
Lapu6g03017 895 FunFam Heat shock 70 kDa protein 4 638 750 - -
Lapu6g03017 895 Gene3D - 638 752 IPR029048 -
Lapu6g03017 895 Gene3D - 212 399 - -
Lapu6g03017 895 Coils Coil 750 770 - -
Lapu6g03017 895 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 747 IPR029048 -
Lapu6g03017 895 Gene3D - 90 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g03017 Lapu-Chr6 40517951 40527737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g03017 25 544 Calmodulin-binding Proteins AT3G12580 27.567 3.57e-58 209