Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g03001 ATGTCTCTCTCCCCTCTGCTCACTCAGTTCTTGAATCCAAGGAAATTCCAGTTCCTCATCAGAATCAAAATGCCCTCTCTTACAAGTTCTAGATTTAACCTCTTTTTGGTGTCTCTCTTTGTTACTTTGGTTCAAATCCAAACCAAGGTGCAATGTTACCAATACAAAGTTGGAGATCTAGATTCCTGGGGGATCCCTACTCCATCAAATTCACAGGTCTATGACAAATGGTCCAAACATCACAACCTGAAGATCGGTGATTCGCTCTTGTTTCTGTACCCACCAAGCCAAGATTCACTGGTTCAAGTGACAGAGGAATCCTACAAGAGCTGCAACCTTAAAGATCCAATCTTGTACATCAACAATGGGAACTCGTTGTTCAACATCACATCAGAAGGGGAGTTTTACTTCACCAGTGGGGAGTCTGGTCATTGCCAAAAGCATCAAAAGCTTCACATAACTGTGGGAGCTGGAGGAAACACCGACACACTTTCTCCAACTTCACTGCCTCAATCTGCACCTTCTTACCCAACTGTTTTTGGCAACATTCCCATCTCTCCTTCCACTACTTCTTCTTCCTCACCTCACCCAACTTCAAAATTTTCACTCATACTTATTGGGTTCTTCCCATGTGCACTGCTCTCTAGCCTACTAAGATAA 660 0.4333 MSLSPLLTQFLNPRKFQFLIRIKMPSLTSSRFNLFLVSLFVTLVQIQTKVQCYQYKVGDLDSWGIPTPSNSQVYDKWSKHHNLKIGDSLLFLYPPSQDSLVQVTEESYKSCNLKDPILYINNGNSLFNITSEGEFYFTSGESGHCQKHQKLHITVGAGGNTDTLSPTSLPQSAPSYPTVFGNIPISPSTTSSSSPHPTSKFSLILIGFFPCALLSSLLR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g03001 219 CDD OsENODL1_like 53 155 IPR041846 -
Lapu6g03001 219 SUPERFAMILY Cupredoxins 52 155 IPR008972 -
Lapu6g03001 219 ProSiteProfiles Phytocyanin domain profile. 53 157 IPR003245 GO:0009055
Lapu6g03001 219 PANTHER BLUE COPPER PROTEIN 53 176 IPR039391 GO:0009055
Lapu6g03001 219 FunFam Early nodulin-like protein 1 52 160 - -
Lapu6g03001 219 Pfam Plastocyanin-like domain 71 148 IPR003245 GO:0009055
Lapu6g03001 219 Gene3D - 53 166 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g03001 Lapu-Chr6 40354163 40355313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g03001 29 185 Phytocyanin Superfamily AT1G64640 53.797 7.00e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g03001 - - vra:106775534 322.013