Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g03000 ATGGGAGGGACGCGTGACCAAAGCCAAAACTTCTCTACCAACCCTTCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTCTACAGAGCCATATTTCTTCCCTTCAACCAAGTCGTTGCCATCAAGTGCTTGGATCTCGATCGCTGTGACATCAATCTCGATGATTTGCAAAGGGAAGCGCAGACGATGAGTCTGATCGATCACCCGAACGTTGTGAAGGCACACTGCTCCTTCGCGGTGGAGCGGAGTCTGTGGGTGGTGATGCCGTTCATGGACGAGGGCTCCTGTTTGCATCTCATGAAGATTGCGTACACGGAGGGGTTCCAGGAGGACGCAATCGGATCCATCCTGAAAGAAACTCTGAAGGCGCTGCAGTATCTCCACCACCACGGCCACATTCATCGGGACGTCAAGGCCGGCAACATTTTACTCCATAGCAACGGCGCCGTCAAGCTCGCCGACTTCGGTGTTGCCGCTTGCTTGTTCGACGCCGGCGACAGGCAGCGCTGCAGAAAAACTTTTGTCGGGACCCCTTGCTGGATGGCTCCTGAGGTGCTGCAACCTTCAAGTGGCTACAATTCCAAGGCTGATATTTGGTCTTTTGGGATTACGGCACTTGAGTTGGCTCATGGTCATGCACCGTTTTCAAAATACCCTCCAATGAAGGTTCTTCTGATGACCATACAGAATGCCCCTCCTGGACTTGATTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCGAACTGTCTGTAAAGAAATTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAATCCCTCCAGCTCAAAGATGCAGCTCAACTAGCAGTGAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACCAACGAGGAGTTAGTGCGTGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGGATGATGGTGATATTGCCGAGAAAAGGGAAGAAGATGAAACCAATTTTTTCACCAATTTCAAGGCAGGTGCGATTGATTCCCAGTTTGGTGCTGGCAAAATGAATTCAGAGAAATCACCGTTGTATAAAATCACATCACAAGTAGGGGCTATAGACACAAAACAGACTGAGCAGAGTGAATACTTGAACATAAACGAGAAGAATCTTGAAAGCGAAATCCAGGAACCTAGATTGCCCAAAAACATTATTTGGAAGAGAAATGGATCACTTTCGGAGGCAACAACATCTAATGTAGAGAAATATATAATTATGAGCAAAATTAAAGGCCAAATGGTTAAAAGCCATCAAACCCAAAGTGGACCACTATTGCCGGTCACAGTTCTAAGTCATTCTAAATCAGAAAGGGGACGAATGTTAGAAAGGCTTGAGAATGGAAATCAGGTACTGGGTGAGAAAAATAATCGTGAAGTGCGACGACCTCCAAATTTTAGCGGTCCATTGATGCTTCCAACACGAGCTTCCGCAAATAGTTTATCCGCTCCAATAAAGTCTTCGGGAGGATTCAGGGATTCCTTGGATGACAAGTCTAAGGCTAATCTAGTACAAATTAGAGGGCGATTTTCTGTGACATCAGAAAATTTAGATCTTGTAAAGGATATTCCTGTAACTTCAGTTTCACGCCGATCTTCACAGGGCTCATCACTGCAGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGCCAATTACTCAGGCCACCAAAAGTTCTGCCACCAACAATAGCTCTGCTTCACTTCTTATGACTCACCTTCAAAATCTTCTCCAGCAAACATCAATGCAACAGGAACTTATAATGAACTTGTTGAAAAGCTTGCGATCTGCTGAAGGGATCGATGTTTCACAGAATGGAAAGTGGCCACCAGTACCTCGCAGTTCAGAAATTAATGGAAGTGTTGACACAGCAGGTTCAGAGAGGGAACGTCTTCTGCTGCTAAAAATAATAGAGCTTCAGACTCGGATGATCACTTTGACTGATGAATTGACCGCTGAGAAGTTAAAATACATGCAGTTGCAACAGCAGCTAATGGCTCTCCAAAGTAAGGAACAAAGTAGGGACAAGAGAGAGTAA 2202 0.4496 MGGTRDQSQNFSTNPSDYKLLEEVGYGATATVYRAIFLPFNQVVAIKCLDLDRCDINLDDLQREAQTMSLIDHPNVVKAHCSFAVERSLWVVMPFMDEGSCLHLMKIAYTEGFQEDAIGSILKETLKALQYLHHHGHIHRDVKAGNILLHSNGAVKLADFGVAACLFDAGDRQRCRKTFVGTPCWMAPEVLQPSSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHVKPPELSVKKLFADLPPLWNRVKSLQLKDAAQLAVKKMPSAEEEAISQSQYQRGVSAWNFDIDDLKAQASLVRDDGDIAEKREEDETNFFTNFKAGAIDSQFGAGKMNSEKSPLYKITSQVGAIDTKQTEQSEYLNINEKNLESEIQEPRLPKNIIWKRNGSLSEATTSNVEKYIIMSKIKGQMVKSHQTQSGPLLPVTVLSHSKSERGRMLERLENGNQVLGEKNNREVRRPPNFSGPLMLPTRASANSLSAPIKSSGGFRDSLDDKSKANLVQIRGRFSVTSENLDLVKDIPVTSVSRRSSQGSSLQKSASVSDWMLDSKQMPITQATKSSATNNSSASLLMTHLQNLLQQTSMQQELIMNLLKSLRSAEGIDVSQNGKWPPVPRSSEINGSVDTAGSERERLLLLKIIELQTRMITLTDELTAEKLKYMQLQQQLMALQSKEQSRDKRE* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g03000 733 Coils Coil 705 725 - -
Lapu6g03000 733 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Lapu6g03000 733 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g03000 733 SUPERFAMILY Protein kinase-like (PK-like) 16 335 IPR011009 -
Lapu6g03000 733 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g03000 733 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Lapu6g03000 733 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Lapu6g03000 733 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 709 IPR047173 GO:0043539
Lapu6g03000 733 Gene3D Transferase(Phosphotransferase) domain 1 99 330 - -
Lapu6g03000 733 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g03000 733 CDD STKc_OSR1_SPAK 16 279 - -
Lapu6g03000 733 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g03000 Lapu-Chr6 40339879 40353513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g03000 7 727 MAP Kinase Kinase Kinase Kinase AT4G24100 62.379 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lapu6g03000 Pkinase 3.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g03000 - - vun:114187757 1187.17