Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02991 ATGTCCTCCCACCGCGTGTTCCAGCTTAAGCTTCATCCCTTAACGGGTAACTCTGAATGGGTCGTCATCGAAGACGACGACGAGAGCTTCGCGCAGAATTTCCAAAAGCCCTTCCTTGCCACGACGTCGTACTTGGACATGCTCAATGACTCCGCCAGAAACGCCGCATTTCGCCAAGCCATTCAGAAAACCATCACCAAACCTTGCCATGTTCTCGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGCCCGTGCCATGGGTGACGAAGGGAAGGTCACAGCGTGTGAATCTTACCTTCCCATGGTGAAGCTGATGAAGAAGGTGTTGCGCCTTAATGGCATGGAGGGAAGAGTCAAAATCATCAATAAGCGCTCTGATGAAGTCCAAGTTGGTCTTGATATCCCTTCACGTGCACATGTTCTTGTAAGCGAGATACTTGATTCAGAGCTACTGGGTGAGGGGCTTATACCGACCCTACAACATGCACATGACAATTTGTTGGTGGAAAATGCTATGACTGTGCCATATCGAGCAACTATACACGGACAGCTGGTTGAAAGCACTTTCTTGTGGAAGTTGCATGATTTTCATAACAATGAAGCTAGTGTATCTGATGGCATTCGACTTACTCCTCCAGGACTTGATAGTGTGTTAAGTGTCAAACGTCAGCAATATGCCATGCATATCGATCCTATACAAGAAGAAATAACATTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGTTGCGTGTAAAGGCAACAAATGATGGGAGAGTTCATGCTGTAGTCTCTTGGTGGGTACTTCAACTTGATCAGGAAGGGACCATTTATTATTCCACTGCTCCTAGGTGGATAAGCTCGCCAACAATTACGAGTCCTGTTGGTTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGCAGTGGTATTTCCATACTCAAAGGGGAAGAAGTTCATTTACTTGCTACTCATACTGAAACTAGTTTCTCATATAATTTTGATACCCTACTAGTACCAACTACTGAGATTTTGAGCCATAGGTGCATGACTGGAGATTTGCAGCTTGTACTACCACCAGAAAGAGCTGCAATTTATGTAGACAAAGAATGGAGGCTTTCAATGTTGAAAGCAGTACAAAGCATGTTGCGGGGAAGAGATCGCTTGTTATGTTTGTCTGTAGATGATAGTGTCTTTTTACCACTTCTTGTGGCAAAGCTTTCAGAAGCAAGTGTAATGTCATTACTTCCAGGGTTGAGGGAAAGGGGCCTCCAATATTTGCAAGCAGTTGCCCGTGCAAATGGTTTGTCACATAGTTGCATTGAAGTTCTTGAAAAATGTGTGCAACAGTTAAACTTGCATGATATACATCAGAAAAAGGTTGATCTGTTAATGGCAGAACCTTTCTATGTAGGACACGATGGTATGCTTCCATGGCAGAACCTGCGATTTTGGAGGGATCGTAGTACCCTTAATGATATCCTCTCTGAAGATGCTCTGATGATTCCTAGTAAAGGAATATTGAGAGCATGTGCCATGTCTCTTCCTGATCTTTGGAAAAGTCGTTGTTGCCTGAGTAGTATTGAGGGTTTTGACCATTCTGTGGTAAATGCTACATTGGGGGCTTGCGGTCATCTACCTGAACTAGAACAGGGTCCCTGTCTCCCCTTTTTCGTCTGGCAGTGTGGAGAATTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTTTCAAAACAAATACGCGAATGTCAAGGAAAATCCCAGGTTAAGTTCACCAAGAACGGGGTATGTCATGGATTTGTATTATGGATTGACTGGGTAATGGATTTCGAAAATTCCATTGTGATTTCAACTGGTCCAGATAGGAAGTACTGGAAGCAGGGAGTTAAGCTTCTTGGAACACCCAGAACAGTCGGCCCTCAAAGCTTGAGAAGTGTCCAACCTTGTTCTGCAGTTGTCGAAGCTTGTTTTAGCCCATTAAAGGGGGAACTCAAAATTATACTCGATTTTTTATGA 2076 0.4374 MSSHRVFQLKLHPLTGNSEWVVIEDDDESFAQNFQKPFLATTSYLDMLNDSARNAAFRQAIQKTITKPCHVLDIGAGTGLLSMMAARAMGDEGKVTACESYLPMVKLMKKVLRLNGMEGRVKIINKRSDEVQVGLDIPSRAHVLVSEILDSELLGEGLIPTLQHAHDNLLVENAMTVPYRATIHGQLVESTFLWKLHDFHNNEASVSDGIRLTPPGLDSVLSVKRQQYAMHIDPIQEEITLLSEPFKIFEFDFWKRPESYGETELRVKATNDGRVHAVVSWWVLQLDQEGTIYYSTAPRWISSPTITSPVGWCDHWKQCVWFVPGSGISILKGEEVHLLATHTETSFSYNFDTLLVPTTEILSHRCMTGDLQLVLPPERAAIYVDKEWRLSMLKAVQSMLRGRDRLLCLSVDDSVFLPLLVAKLSEASVMSLLPGLRERGLQYLQAVARANGLSHSCIEVLEKCVQQLNLHDIHQKKVDLLMAEPFYVGHDGMLPWQNLRFWRDRSTLNDILSEDALMIPSKGILRACAMSLPDLWKSRCCLSSIEGFDHSVVNATLGACGHLPELEQGPCLPFFVWQCGEFDVLSETFDVMEFDFSKQIRECQGKSQVKFTKNGVCHGFVLWIDWVMDFENSIVISTGPDRKYWKQGVKLLGTPRTVGPQSLRSVQPCSAVVEACFSPLKGELKIILDFL* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02991 691 FunFam Protein arginine N-methyltransferase 37 179 - -
Lapu6g02991 691 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 442 660 IPR025799 GO:0016274|GO:0018216
Lapu6g02991 691 Gene3D - 180 360 - -
Lapu6g02991 691 Gene3D Vaccinia Virus protein VP39 372 520 IPR029063 -
Lapu6g02991 691 FunFam Protein arginine N-methyltransferase 1.6 524 690 - -
Lapu6g02991 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 441 662 IPR029063 -
Lapu6g02991 691 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 23 352 IPR025799 GO:0016274|GO:0018216
Lapu6g02991 691 PIRSF Arg_N-mtase 4 687 IPR014644 GO:0006479|GO:0008168
Lapu6g02991 691 FunFam Protein arginine N-methyltransferase 7 371 520 - -
Lapu6g02991 691 Gene3D Vaccinia Virus protein VP39 38 179 IPR029063 -
Lapu6g02991 691 FunFam Protein arginine N-methyltransferase 1.6 180 366 - -
Lapu6g02991 691 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 355 691 IPR025799 GO:0016274|GO:0018216
Lapu6g02991 691 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 351 IPR029063 -
Lapu6g02991 691 Gene3D - 524 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02991 Lapu-Chr6 40153170 40162856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02991 32 183 C2H2 Transcription Factor Family AT3G12270 28.571 1.03e-10 62.8