Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02990 ATGCTTGGCCCTGATCGTCGCGCGGTGCTTCAAGTGGTGGTGGCATGGGTGGTGGTGGTAGCGCTGTTAGGGTGCGACGCGGCAGAAGGTTTGAAGGTGCTGGGAACACTGCTTTCTCTGATTGATGTTTTGCCTTTGTTCTCGAACACTGGTTGGGGTCAGAATATGCCCGGAGCATGGGAGTATGCCCGGAGCATGTCTGGCAAGCCATATGAAGTATACAATAAAACCAGCAATTGTGTTAACGACATGAACCGTTTGCTAAAAGATCATTTAAACCTTAAAATAGGAAACGGCCTAGGGAGAATAGAAAATGCTTATGGTTGGGGAAAGCAACATACTATTACTAATAAGATGAATGGGATGGAATTATGGACGGACTATTATGCTGGAATCAAGGATTTTGGTGATGTTACACTCTGTGCTTTTGTGCTTGTTGGTACAGATTTGAGTGAAAGGAAGTCTGGTTTTGAATGGCATGTTGTCTTGCAGCCAGCTTATTCTGCTAACATGTGGAATGAAGCATTGAATAAGCGGTTAGGGACTGAGGTAGGTACAATTAAATTTGTTTTTTTCCATAACCACGTTGGGAAAACCACACTGAAACATTTTAGGAATAACCCCCTATTGACAAATATAAGCATTCAATCTCCACCATTTGCCGCACCGCCACAAAGTTCTCCAGTTTCTTACGGTGCATGTGGTCATGGTTTTCTGCTGAATCAGCAGAGGAAGAAGCCTGGAGTGTGGAGGGTAATAATAACCGTGCATAGGAGTCATTCTTTGGAGGAGTTCGTCGTGGGTGCCGCATCGTTGTTTGCAGCTCTCGTAATTGTATTTGTTTATTGCAAAAGAAGAAAACGACAGGACTTTTTCTTTGATGTTGTGGTGAGGAGGATCCTGAAGTTCACCTTGGTCGACTTAAAAGATTTTCATTGCGTGAACCGCAAGTTGCAACTGGATGCCTTTAACAACGAAACATTCTTGGTAGAGGTGGATTTGGCAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCTGCAAGGTTTCTGTATGACACCTACTGAACGTTTGCTTGTATATCCTTTCATGTTTAACGGAAGTGTAGCTTCATGTTTACGAGATCGTCCGCAAGCACAACCACCAGTTGAATGGCTAAAACGGAAGCGTATTGCTCTAGGAGCTGCAAGGGGGCTTGCTTATTTTCATGATCATTGTGATCCGAAGATTATTCATCGTGATGTCAAAGCTGCAAATATATTGTTGGATGAGGACTTTGAAGCAGTTGTTGCAACTGGTTTGGATTTGCATGATATTATAGTAGAGACGGAGAAGCGTGGGATACCTTTCGATGAACTACTCACTATTCCTGAACAAGGTGAATGGGTATACAGTGATGGGAAGTCAACGACTTGTGTTGCATTTATCCTCTCAATGTATAAAGAGGCTGGAGTTTTTGGTCCTATTTCTAGTTCCATTCAAGTAACTGAGTTCATAATTCGTGATGCGTACATGTCACACATCATCCCTTCGTTGAATTTATTGGTTGAGATGGATGTGTCTGGGATGGATTTTGTTGTGGTTGGTACCTATAGAAGTTTTGCTGACATCGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCATCTCATATGGGATCACTATACAACTTTCCCAAGCCAAGTGCCTTTTATGGGGTGTTTGACGGGCATGGAGGACCTGAAGCTGCAGCTTATATAAGAAAAAACGTGATAAAATTCTTCTTCGAAGATGTCTAA 1803 0.4282 MLGPDRRAVLQVVVAWVVVVALLGCDAAEGLKVLGTLLSLIDVLPLFSNTGWGQNMPGAWEYARSMSGKPYEVYNKTSNCVNDMNRLLKDHLNLKIGNGLGRIENAYGWGKQHTITNKMNGMELWTDYYAGIKDFGDVTLCAFVLVGTDLSERKSGFEWHVVLQPAYSANMWNEALNKRLGTEVGTIKFVFFHNHVGKTTLKHFRNNPLLTNISIQSPPFAAPPQSSPVSYGACGHGFLLNQQRKKPGVWRVIITVHRSHSLEEFVVGAASLFAALVIVFVYCKRRKRQDFFFDVVVRRILKFTLVDLKDFHCVNRKLQLDAFNNETFLVEVDLASGNDQHGCASKFASLQGFCMTPTERLLVYPFMFNGSVASCLRDRPQAQPPVEWLKRKRIALGAARGLAYFHDHCDPKIIHRDVKAANILLDEDFEAVVATGLDLHDIIVETEKRGIPFDELLTIPEQGEWVYSDGKSTTCVAFILSMYKEAGVFGPISSSIQVTEFIIRDAYMSHIIPSLNLLVEMDVSGMDFVVVGTYRSFADIGPRRYMEDEHIRIDDLSSHMGSLYNFPKPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDV* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02990 600 Gene3D Transferase(Phosphotransferase) domain 1 301 437 - -
Lapu6g02990 600 PANTHER OS01G0793500 PROTEIN 163 187 - -
Lapu6g02990 600 SUPERFAMILY PP2C-like 531 598 IPR036457 -
Lapu6g02990 600 SUPERFAMILY Protein kinase-like (PK-like) 348 434 IPR011009 -
Lapu6g02990 600 Gene3D - 528 600 IPR036457 -
Lapu6g02990 600 ProSiteProfiles Protein kinase domain profile. 238 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02990 600 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lapu6g02990 600 ProSitePatterns PPM-type phosphatase domain signature. 572 580 IPR000222 GO:0043169
Lapu6g02990 600 Pfam Protein kinase domain 349 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02990 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02990 Lapu-Chr6 40123436 40128102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02990 272 450 Receptor kinase-like Gene Family AT4G33430 47.005 4.30e-49 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lapu6g02990 Pkinase 3.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02990 - - gmx:100804180 199.519