Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02982 ATGGTTTCTTTGATCCGTCTGAAATTGTTCTCAATTCTTCTGTTCTACTTACTTGGCACCCTTAACTTTTCACCAACTGAAACAGCCTCAACTTTCAGGCACTACAATTGCACAAACAAGCAAAAGTTTAGTCCCAAAAGCAGTTACCAATTCAACCTAAACAAACTCTTATCTGAACTTACATCCAAAGTTAACAGCACCAACCATTACAACACCACAGTGAGTGGAAAAAACAAACGAGACATTGTCTATGGCCTCTTCATGTGCAATGGATATATAGAGAAATGTGGAGAATGTGTCAATACTTCCATTCAGACACTTAAATCAAATTGTGTCTTCAACAAAGAGGCTATAATTTGGACTCATGAATGCTTGGTTCGCTACTCAAACAGGTTTTTCTCCAACACTACTGAGAAATGGCCATCATGGTGTATTAAGAACAGTGGGGATTATGAGGGTGAATTGGATGGTTTCAACAAAGCGTTGAGTTCCTTGATGGAGGATCTTCTGACTGAAGCCAGTGAAGCTCCAATGGGTTCTATTAAATTTGCAGTGAAGAAAATAACTATTTCTGAGGACAAACACTTTTTTGGCTTTGCTCAGTGCATCCCTAACCTCTCCAAGGACAATTGCAATAAGTGCCTTAGGGATGCCATGGATTTTCTTCAAACATGTGCAAGAGGCTCGATAGGAGGAAGAGTTATATATCCCAGCTGTATTGTTAGATATGATCATTATCTATTTTTCCCACTTCCTGGAGGTGGGGAAGACATTACAACAGAATTGAACTCTTTGCAATTTGATTTGAGAACTATTCAAGAAGCAACAAACAAGTTTTCTGATGATAACAAGATAGGGGAAGGTGGTTTTGGAGCAGTTTACAAGGGTGTGTTCCCAAATGGACTTGAAATAGCAGTAAAGAGGTTGAAAAAAAATTCCAGTCAAGGAGCTATAGAATTCAAGAAAGAGGTTTTGCTAATCTCCAAACTTCAACACAGAAATCTTGTGAGACTCTTAGGATTTTGCGTGGAAAGGAATGAGAAGATACTCATTTATGAGTTTGTGCACAACAAAAGCCTTGATTACTATCTATTCAGTCCTCAAAATCATACGAAATTAAGTTGGTTTCAACGATATGAGATTATAAGAGGAATTGCACGAGGAATTCTCTATCTTCACGAGGATTCTCTTCTCAACATTATACATTGTGATCTTAAACCTAGTAATATTTTGTTAGATAACAAAATGAATGCAAAAATATCAGATTTTGGATTAGCAAGGATTATTTCCATTGATCAAATGCAAGGGCATACTAGTATAATTTCTGGAACATATGGTTACATGTCTCCTGAATACGCAATGCTTGGCCAATTTTCTGTGAGATCAGATGTTTTTAGTTTTGGAGTTATAATTCTTGAAATCATTAGTGGAAAAAGAAACGTTGATTGTAATGGAAGAGATTATGATGACCTCTTAAGCTATGCTTGGAAGAAGTGGAAGGAAAATAAACCATTTGAATTGTTGGATCCCACATTACAACACTCTTTCTCTGAAGCAGAAATCACTATGTGCATACAAATTGGTCTACTATGTGTTCAAGGAAACCCAGATCACAGACCTATTATGGAAAAAATTGCTTTGTATTTTAGTTGTGATCAAGTTGATATGTTGCCTTTACCTAAAGAGCCAACATTTTTTAGAACTCAAGGATGTTTGTAA 1719 0.3647 MVSLIRLKLFSILLFYLLGTLNFSPTETASTFRHYNCTNKQKFSPKSSYQFNLNKLLSELTSKVNSTNHYNTTVSGKNKRDIVYGLFMCNGYIEKCGECVNTSIQTLKSNCVFNKEAIIWTHECLVRYSNRFFSNTTEKWPSWCIKNSGDYEGELDGFNKALSSLMEDLLTEASEAPMGSIKFAVKKITISEDKHFFGFAQCIPNLSKDNCNKCLRDAMDFLQTCARGSIGGRVIYPSCIVRYDHYLFFPLPGGGEDITTELNSLQFDLRTIQEATNKFSDDNKIGEGGFGAVYKGVFPNGLEIAVKRLKKNSSQGAIEFKKEVLLISKLQHRNLVRLLGFCVERNEKILIYEFVHNKSLDYYLFSPQNHTKLSWFQRYEIIRGIARGILYLHEDSLLNIIHCDLKPSNILLDNKMNAKISDFGLARIISIDQMQGHTSIISGTYGYMSPEYAMLGQFSVRSDVFSFGVIILEIISGKRNVDCNGRDYDDLLSYAWKKWKENKPFELLDPTLQHSFSEAEITMCIQIGLLCVQGNPDHRPIMEKIALYFSCDQVDMLPLPKEPTFFRTQGCL* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02982 572 ProSiteProfiles Protein kinase domain profile. 279 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02982 572 Pfam Salt stress response/antifungal 37 130 IPR002902 -
Lapu6g02982 572 Pfam Salt stress response/antifungal 149 246 IPR002902 -
Lapu6g02982 572 FunFam Cysteine-rich receptor-like protein kinase 10 254 354 - -
Lapu6g02982 572 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Lapu6g02982 572 Gene3D Phosphorylase Kinase; domain 1 256 354 - -
Lapu6g02982 572 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 42 566 - -
Lapu6g02982 572 SUPERFAMILY Protein kinase-like (PK-like) 264 561 IPR011009 -
Lapu6g02982 572 FunFam cysteine-rich receptor-like protein kinase 10 355 556 - -
Lapu6g02982 572 CDD STKc_IRAK 285 546 - -
Lapu6g02982 572 ProSiteProfiles Gnk2-homologous domain profile. 139 248 IPR002902 -
Lapu6g02982 572 Pfam Protein tyrosine and serine/threonine kinase 282 546 IPR001245 GO:0004672|GO:0006468
Lapu6g02982 572 Gene3D Transferase(Phosphotransferase) domain 1 355 554 - -
Lapu6g02982 572 Gene3D - 142 248 IPR038408 -
Lapu6g02982 572 Gene3D - 29 133 IPR038408 -
Lapu6g02982 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Lapu6g02982 572 SMART serkin_6 279 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02982 572 ProSiteProfiles Gnk2-homologous domain profile. 31 133 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02982 Lapu-Chr6 39662449 39665187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02982 9 566 Receptor kinase-like Gene Family AT4G11480 37.681 5.57e-139 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu6g02982 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02982 - - mtr:11443024 750.74