Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02946 ATGGAACCCAGATTGGGGTTTGTGCTGCTTTCCCTCGTGCTGTTTTGTGTCGTGTTGAGAGCAGAATCCGCTTGCAGGCAGGGTTGCCATCTGGCACTGGGGTCCTACTACATGTGGGAGGGCTCCAACCTCACCTACATCTCCCAGATCATGTCCTCCACCCTTCTCTCCACTCCCGACGACATAGTCCTCTACAACAAGGACACCATCCCCAACAAGGACAGCGTCCAGGCCTTCATAAGGGTCAACGTCCCCTTCCCTTGCGACTGCATCGACCAACAGTTTCTCGCCCACACCTTCCAGTACGATGTTCAGTCGCGGGACACCTACGAGCATGTTGCCACGACCGTCTTCTCCAACCTCACCGACGTTGCCTGGCTCAGGAGGTTCAACACCTACGAACCCGATAACATTCCCGACACGGGCACGCTCAACGTTACGGTCAATTGTTCTTGTGGGAACTCTGATGTTGCCGATTATGGGTTGTTCATCACCTACCCTCTTAGAACCGGGGAGACTCTCGGCTCCGTGGCTGCTAATCAGACCCTTGACTCTGGCTTGCTGCAGAGGTACAATCCTGACGTGAATTTCAACCAGGGGAGTGGACTCGTTTATATTCCCGGAAAAGATCAAAATGGTAGCTATGTGCTTTTGGCGTCCAGTTCAGGAGGTCTTGCTGGTGGGGCTATTGCAGGAATAGCTGCTGGAGTTGTGGCAGTTCTTCTGGTATTAGGAGTGTTTATATATTTTAGAAGATTCCAGAAGAAGACACAGAAGGAGGAACTTCCACGAGATTCTAGTGCACTCTTTGCTCAAGATGGGAAAGATGAAACTTCTCGTCGTAGTGCAAATGAAACTTCAGGACCTGGTGTTCCTGCCGCCATCACAGGCATAAAAGTGGACCAATCGGTGGAATTCACATATGAGGAACTGGCAACCGCCACAGATAACTTTAGTTTGGCTAATAAAATTGGTCAAGGTGGTTTTGGGTCAGTCTATTATGCGGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCGAAAGAATTTCTCGCTGAATTGAATGTCTTGACACGTGTTCATCATTTAAACCTGGTGCGGTTGATCGGATATAGCATTGAGGGATCTCTTTTCCTTGTCTATGAATACATTGAAAATGGAAACTTAAGTCAACATCTGCGTGGTTCAGGTAGTAGAGAACCATTGCCATGGGCTACTCGTGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATTCACGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGCAAATATATTAATAGACAAAAACTTCCGGGGCAAGGTTGCTGATTTTGGATTGACCAAACTTACAGAAGTTGGAAGTTCATCACTTCCCACTGGTCGCCTTGTTGGAACATTTGGATACATGCCACCGGAGTATGCTCAATATGGGGATGTTTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCAGCTAAGGAAGCAATTGTGAAGACAAACGATTCTGTTGCCGACTCAAAGGGCCTTGTAGCTCTGTTTGATGGAGTTCTTGGTCAGCCGGATCCCACTGAAGGTCTGTGCAAACTAGTTGATCCAAGGCTTGGGGATAACTACCCAATTGATTCTGTTCGCAAGATGGCACAACTAGCCAAAGCATGTACACAAGACAATCCCCAACTTCGTCCAAGTATGAGATCTATTGTGGTTGCACTAATGACACTTTCTTCAACTACAGACGAGTGGGATGTTGGTTCCTTCTATGAAAACCAAAATCTTGTGAATCTAATGTCAGGAAGATAG 1857 0.4685 MEPRLGFVLLSLVLFCVVLRAESACRQGCHLALGSYYMWEGSNLTYISQIMSSTLLSTPDDIVLYNKDTIPNKDSVQAFIRVNVPFPCDCIDQQFLAHTFQYDVQSRDTYEHVATTVFSNLTDVAWLRRFNTYEPDNIPDTGTLNVTVNCSCGNSDVADYGLFITYPLRTGETLGSVAANQTLDSGLLQRYNPDVNFNQGSGLVYIPGKDQNGSYVLLASSSGGLAGGAIAGIAAGVVAVLLVLGVFIYFRRFQKKTQKEELPRDSSALFAQDGKDETSRRSANETSGPGVPAAITGIKVDQSVEFTYEELATATDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELNVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGSREPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNDSVADSKGLVALFDGVLGQPDPTEGLCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDEWDVGSFYENQNLVNLMSGR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02946 618 FunFam PTI1-like tyrosine-protein kinase 3 389 604 - -
Lapu6g02946 618 Gene3D Transferase(Phosphotransferase) domain 1 389 610 - -
Lapu6g02946 618 ProSiteProfiles Protein kinase domain profile. 318 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02946 618 Pfam Protein tyrosine and serine/threonine kinase 320 589 IPR001245 GO:0004672|GO:0006468
Lapu6g02946 618 FunFam LysM receptor kinase 2 297 388 - -
Lapu6g02946 618 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Lapu6g02946 618 MobiDBLite consensus disorder prediction 264 291 - -
Lapu6g02946 618 CDD STKc_IRAK 324 587 - -
Lapu6g02946 618 SUPERFAMILY Protein kinase-like (PK-like) 300 590 IPR011009 -
Lapu6g02946 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Lapu6g02946 618 Gene3D Phosphorylase Kinase; domain 1 293 388 - -
Lapu6g02946 618 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 604 IPR044812 GO:0019199|GO:0045087
Lapu6g02946 618 SMART serkin_6 318 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02946 Lapu-Chr6 36465005 36475936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02946 1 618 Receptor kinase-like Gene Family AT3G21630 57.372 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu6g02946 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02946 - K13429 gmx:100777781 1034.63