Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02944 ATGATGACATTGGTTGACGAGGTGGAGGTGGAGGTGGAGGCGGAGGCGTCGGTGCCAGTAAAGAAGGTGCCATACGGCGACGTATTCGAGGCGTCCCGCGCTGGCGACGTGGAGCGGCTCCGGTACCTGCTGGAGACAGGCGTGAACGTGAACGCGCGGGACCAGTGGGACTCGGTGGCCCTCTACTATGCCTGCCTGGCCGGCCACCTCGACGCTGCTCGCATGCTCCTCGAAAACGGCGCCATCTGCTCGGAACATACCTTTGACGGCGATCGCTGCCACTACGCCGCCCTCAATCTCAAGGTCCGCAAACTCCTCAAGGCGTTCGAGGCCCGGCCCCCACCCTTGGACCCCTTGCAGGCAGCTTTGCGTGACACCTTCCTCGCCTGTATTTCATCCACTCAGGGCTCCATTTGCTGCCACTTCCCTCCAGATGTAGTATTTATTGTACAAGGAAAACGTATTCAAGCTCACAGAGTTATATTAAGTGCGAGGTCACCGTTTTTCAAGAAAAAGTTTACTAATGATTGGAAGGATCGCAATGAAGTTAGATTCTCCAGGGAAAGGTTGTCTTATCCTGCACTTTATAGCCTTATACACTTCTTTTATTCAGACAGATTAGAGATTGCTATTGATGACATGGAGGATCTTGTGAGAATCTGCAAAGTATGCAGATGTGAATCACTGCATAAGGTTCTCGAGAAAGAAGTCATTCATCAAACATATGCAGACTATAAAGCACTGAGAGATGTAGATAATTCTCAGAAACGGTATATTTTGCAAGGTCTATCTCTTCCTGAAGAGGACAGGCTTCCTGCTGCCTTGCATCGAATCCTTCTGACTGCCCTTTCAAATTCAACCCATGAAAGTGGTGAAGAAGATACATTGGTTTCTATGATGGATGCCATGCAGATGACCAAATCTCTGGATGACCTTGCTGATGTTTGTGTAAAAGTTGATAGAAATATTTTCCGCTGTCACCAAGTTATTCTAGCATCCAGGTCAGAATATTTCAAAGCAAGATTATCACATATGAAGGACTTCCATGAGGGGAAATATAAGTTATCTGTTGACACTCTTCCTTGTCTTGAAGAACATGACTTAAGCAAGGAAGCTTTTGAGAAAATGATTGAATATATGTACACTGATCGTTTGCAAGATATAAATCCAGATCAGGCTGAGGAACTGTTTGATGTTGCTTCCAGATATTTATTGTTTCCTCTCAAGCGTGCAGTGGCTGATGTCTTGTTGCCACACTTGGAAATGGTGTCACTTGATGAACATTGCCATTGGTTAATACTAGCAGACATGTATGGTGTTTTCAAGATTCGGGAGTATTGTCTAGATACCATTGCTTGTAATTTTGACACTTTTGCTGATACCAAAGAATTCCGGGCAATGTTGTTGACTTTGCCTCCACCATCTGGAGACTCCTGCCTTCGTACCACTGTCCCGAGCATTCCTGGATCTTCTCTTAACGCTGATCAAGGAAATCTTCTTGATGATTTACGAGAGAAATGGCTTGAAATTGAAGCGGCTGAGCTTGATAAGAGAGATGAGAGTGCTTTGCAATTTGACAAGCGACTAGAGATGCTTATGCTTGTTGCAGAGCAAGAAAAATCATCGGACAATGCTGATTCAGATGACACTCTTGCATTTCTTCCCAATCACCACTCTGATTAA 1683 0.4557 MMTLVDEVEVEVEAEASVPVKKVPYGDVFEASRAGDVERLRYLLETGVNVNARDQWDSVALYYACLAGHLDAARMLLENGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLDPLQAALRDTFLACISSTQGSICCHFPPDVVFIVQGKRIQAHRVILSARSPFFKKKFTNDWKDRNEVRFSRERLSYPALYSLIHFFYSDRLEIAIDDMEDLVRICKVCRCESLHKVLEKEVIHQTYADYKALRDVDNSQKRYILQGLSLPEEDRLPAALHRILLTALSNSTHESGEEDTLVSMMDAMQMTKSLDDLADVCVKVDRNIFRCHQVILASRSEYFKARLSHMKDFHEGKYKLSVDTLPCLEEHDLSKEAFEKMIEYMYTDRLQDINPDQAEELFDVASRYLLFPLKRAVADVLLPHLEMVSLDEHCHWLILADMYGVFKIREYCLDTIACNFDTFADTKEFRAMLLTLPPPSGDSCLRTTVPSIPGSSLNADQGNLLDDLREKWLEIEAAELDKRDESALQFDKRLEMLMLVAEQEKSSDNADSDDTLAFLPNHHSD* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02944 560 CDD BACK 429 467 - -
Lapu6g02944 560 ProSiteProfiles BTB domain profile. 144 211 IPR000210 GO:0005515
Lapu6g02944 560 SMART BTB_4 313 420 IPR000210 GO:0005515
Lapu6g02944 560 SMART BTB_4 144 241 IPR000210 GO:0005515
Lapu6g02944 560 FunFam BTB/POZ domain-containing protein 139 260 - -
Lapu6g02944 560 SUPERFAMILY POZ domain 298 419 IPR011333 -
Lapu6g02944 560 Gene3D Potassium Channel Kv1.1; Chain A 141 241 IPR011333 -
Lapu6g02944 560 ProSiteProfiles Ankyrin repeat profile. 31 55 IPR002110 GO:0005515
Lapu6g02944 560 Gene3D Potassium Channel Kv1.1; Chain A 283 452 IPR011333 -
Lapu6g02944 560 FunFam BTB/POZ domain-containing protein 22 140 - -
Lapu6g02944 560 SUPERFAMILY Ankyrin repeat 30 108 IPR036770 -
Lapu6g02944 560 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 14 536 IPR044515 -
Lapu6g02944 560 Pfam BTB/POZ domain 309 416 IPR000210 GO:0005515
Lapu6g02944 560 Pfam BTB/POZ domain 142 240 IPR000210 GO:0005515
Lapu6g02944 560 Gene3D - 28 140 IPR036770 -
Lapu6g02944 560 CDD BTB_POZ_ZBTB_KLHL-like 312 403 - -
Lapu6g02944 560 Pfam Ankyrin repeats (many copies) 30 77 IPR002110 GO:0005515
Lapu6g02944 560 ProSiteProfiles BTB domain profile. 313 389 IPR000210 GO:0005515
Lapu6g02944 560 MobiDBLite consensus disorder prediction 538 560 - -
Lapu6g02944 560 SUPERFAMILY POZ domain 141 236 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lapu6g02944 BTB 3.4e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02944 K10520 - gmx:100812009 982.63