Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02941 ATGAGAAGAAAGAGTGCAGGGAAACGTAGGGTTGTGGCACGTCCAACTGTGACTGCTCCTTCCCTCTTCGCCATTCCTCACCTCTCGGATGAACGTAACGCAGCAACTGCGTTTGATAGTCAGAGTGACGATGACGATTACGTTCATCGCCGTCCCCAACCTCCACCCGAGCCTCTGGACTCGTTCGACAAGAGCATCTGCGTATGCTGCGGCGATAAAGGCAATGAGAGGCTTTTCGTTTGCAGCGAAAGGCGCTGCCCTGTCACTGTCCACTCCAGCTGCATCGGTTCCGAACCTAAATTCGACGATTCGGGTAACTTCTACTGCCCCTACTGCTGGTACAACCGCGTCGTGGACACGTGTCAACAACTGAGAGAGAAATCCCTGGTCGCAAAGAAAGCTTTGTCACAATTTTTGGACGCACGTGCTGATTCTGCTGTTGCACGTGGGGGTCTGGTCCAGGATGAATATGAAGAGAATAATTATAAAGATGAAGAAAAGGTGTCTGGGACGGTTAGTTCTGTGAGTGAGACTGATAATGCAGAACCCGACGTCGTTTCAGTGAAGAAAAAGAAGGGCCAGAGGAAGGATTCTTCTGGAAGGAAGAAGCTTTTGTTACTACAAGAAGAACATAAACATCATAACAACAGAGGGAAAATTGCTGCTAATGTAATAGAGGAGGAAGTTACAAGCTTCCAAGCTTTGAGGCGATCACAGAGGTCGCCAGTGAAAGGAATGAAGCGGACTTCACTGACTGCAAAGCGTAAGAGATTACTTTGGACGGCTGAAGAAGAGAAAGTTCTGAAGGAAGGAGTATTAAAGTTCTCAACAGAAAATCAGAATACCCCTTGGAGGAAAATTTTGGAATTTGGTTGTCGTGTATTTGACAAGACTCGAACTCCTGTTGATCTCAAGGATAAATGGAAGAACATTATCTCCAAGGAAGGTAGAATGGCAAAATATAATTGTAGTCCTGATTTAAAATAA 987 0.46 MRRKSAGKRRVVARPTVTAPSLFAIPHLSDERNAATAFDSQSDDDDYVHRRPQPPPEPLDSFDKSICVCCGDKGNERLFVCSERRCPVTVHSSCIGSEPKFDDSGNFYCPYCWYNRVVDTCQQLREKSLVAKKALSQFLDARADSAVARGGLVQDEYEENNYKDEEKVSGTVSSVSETDNAEPDVVSVKKKKGQRKDSSGRKKLLLLQEEHKHHNNRGKIAANVIEEEVTSFQALRRSQRSPVKGMKRTSLTAKRKRLLWTAEEEKVLKEGVLKFSTENQNTPWRKILEFGCRVFDKTRTPVDLKDKWKNIISKEGRMAKYNCSPDLK* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02941 328 Gene3D - 249 313 - -
Lapu6g02941 328 MobiDBLite consensus disorder prediction 163 202 - -
Lapu6g02941 328 SMART sant 256 314 IPR001005 -
Lapu6g02941 328 Pfam Myb-like DNA-binding domain 260 311 IPR001005 -
Lapu6g02941 328 MobiDBLite consensus disorder prediction 38 59 - -
Lapu6g02941 328 MobiDBLite consensus disorder prediction 38 57 - -
Lapu6g02941 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 150 IPR013083 -
Lapu6g02941 328 ProSiteProfiles Myb-like domain profile. 252 312 IPR001005 -
Lapu6g02941 328 ProSitePatterns Zinc finger PHD-type signature. 67 112 IPR019786 -
Lapu6g02941 328 SUPERFAMILY Homeodomain-like 255 313 IPR009057 -
Lapu6g02941 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 252 316 IPR017930 -
Lapu6g02941 328 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 47 315 - -
Lapu6g02941 328 MobiDBLite consensus disorder prediction 167 181 - -
Lapu6g02941 328 MobiDBLite consensus disorder prediction 183 202 - -
Lapu6g02941 328 SUPERFAMILY FYVE/PHD zinc finger 57 115 IPR011011 -
Lapu6g02941 328 CDD SANT_TRF 260 312 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02941 257 311 Single Myb Histone (SMH) Gene Family AT3G49850 50.000 8.72e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02941 - - vun:114169284 424.861