Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02923 ATGGAGTTATGTGACCACAGCTTATCCATAAACCATTGCCCAGCATTGCTTACTGAACGACATGAAATAGAAGCTTTATATCAGCTTGCTAGGGCATTGCAATTTATACATGGGAAGGGAATAGCTCATCTAGATGTTAAGCCGGAAAATATTTATGTAAAGAAGGGTGTTTACAAGCTTGGTGATTTTGGATGTGCAACTCTACTGGATAATAGCTTGCCAATTGAAGAGGGTGATGCGCGTTACATGCCTCTTGAAGTTCTTAATGAGAATTATGATCATCTCGACAAGGCTGATATCTTCTCTCTAGGGGCTTCTATGTTTGACTTAATTCGCAGGTCGCGCTTGCCAGAAGCAGAAACTCCGTTCTGTAATCTTAAACGGGGAAGGTTGCCACACTTGCCAGGAGTTACACTGCAATTTCAAAACTTGCTCAAGGTCATGATGGACCCTGATCCTCTTAATCGTCCTTCTGCTACGGAGATTTTGGGAAATTCTATATTTGGAGGGTGCAGGAAAACCCCAAGGAGTTGCGGGTTTTTTTCTACCAATTGGGGCCCTCCCTTCACCACCCCCATGCGGATGGTCTACAGGTCGGGTAGAAAGGTTGTGGTCGCAGATGAGGGGGTTGGTGAGGAGGTTGTGGAAGAGGAAATAGGGGAGACTGCCAAGGCAAGGGACGAGGTAGTCACAGTACACAACAAAGTGTGGAAAATCCTCATCGATTAG 729 0.454 MELCDHSLSINHCPALLTERHEIEALYQLARALQFIHGKGIAHLDVKPENIYVKKGVYKLGDFGCATLLDNSLPIEEGDARYMPLEVLNENYDHLDKADIFSLGASMFDLIRRSRLPEAETPFCNLKRGRLPHLPGVTLQFQNLLKVMMDPDPLNRPSATEILGNSIFGGCRKTPRSCGFFSTNWGPPFTTPMRMVYRSGRKVVVADEGVGEEVVEEEIGETAKARDEVVTVHNKVWKILID* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02923 242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 41 53 IPR008271 GO:0004672|GO:0006468
Lapu6g02923 242 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02923 242 Pfam Protein kinase domain 15 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02923 242 SUPERFAMILY Protein kinase-like (PK-like) 1 173 IPR011009 -
Lapu6g02923 242 Gene3D Transferase(Phosphotransferase) domain 1 6 169 - -
Lapu6g02923 242 FunFam Wee1-like protein kinase 3 172 - -
Lapu6g02923 242 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 1 167 - -
Lapu6g02923 242 SMART serkin_6 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02923 Lapu-Chr6 35154580 35167927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02923 1 172 Core Cell Cycle Gene Families AT1G02970 58.621 1.20e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Lapu6g02923 Pkinase 4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02923 K06632 - gmx:100784055 262.307