Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02917 ATGAATTCCACCCGAACCATCTTCTCATCAGCCACGCTCGTGGTCGCCATCCCTTACTCACGTCGTGAGATCTTCAACGTGTGCATGGATCAGCCCATGAAGATAATCTCCGATGGCGTTTGGAACTACCCAAATGGAGCATTGCCTTCACAATCTGCATTCACCATGCTTGAGCTTCAAATAGTTATCATTTTTGCCGTCACGCAAGCCTTTCATTTCATTCTCAAGCGATTAGGGTTCCCTTATTTCGTTTCACAAGTCATGGCTGGTTTTCTTCTAGGGCCATCAATTCCGACAGGACCATTTGAAGAGTACAAGGAGATGCTGTTCCCTTTTGGGAGTGCAGATATCCTGAACACAGTGTCATCATTAGGGTATTCATTCTTCCTCTTCATAACCGCAGTGCAAATGGACCTAAGCTTGATCACGAAAACGGGGAAGAAGGCATGGGTCATCGCACTTTCCTCCTACTTCATTTCCTTAGGTTTAGGGTTTTCCGTCATGTGCTTGGCCGCTCCCCAGCTGAAACTCGTAGTCGAGGATTACAACAGCCTCTCGAGCTTGCCTATGGTCATCATAACTCAGGGCGGCGTTTCCTTCGCCGTCGTCTCAACCTTGCTCAACGACCTCGGAATCCTCAATTCCGAACTCGGACGCCTTGCCCTCTCCACAGCTTTCGTCAATGATCTAACTGGTGGAATTTTAGTAGGGTTCGGTTCTGACTTTATGAAAAGCATCAAATTGGAATTTTCTGATCAAATTACAAACCTGGTGGTCTTTTTTGTTTACCTAATCTGCGTTCCACTAATTGGGCGTCCAATGATGAAGTGGATTGTGAAAAACACCCCTGAAGGGAAACCCGTGAATAAGATATATATCTATGCCATCATAGTGACGTTTTTGGGATTAGGGTTCTTTGCAGGGTATTTCAACCAGCCCTTCTTAGTAGGGGCTGTTATTGTAGGCCTTGCAGTCCCTGAAGGTCCTCCTTTGGGGTCTGAATTGGTTTCCCAACTTCAGTTGTTTTCCAATTGGTTCTTATCCTCAATTTTTGTCACATGTTGCACCATGAAAGTGGATCTCAAAGACTGTGGACCTTTCTCTTTCTTTATCACCGTATCCTTCTTCATTCTATTGGCCCAATTGATTAAGATGCTATTGTGCATGGGAATTTGTCGGTACTGTAAAATGCCCTTCTCTGATGGTTTCTGCCTTGCTCTCATTTTGAGCTGCAAAGGTGTTGTGGATATCTGCTCCTATGTCCTAATCTTCGATACAGTGGCACAAAATAAAAAAGTAATAGGTGTTTTGATCGTCTCGGTCTTGGTCCTGGGAACAACTTCGACGCTTGGTGTGAAGGCATTGTATGACCCTTCAAGAAAATACGCAGGGTATCAAAAAAGGAACATTATGAGCTTGAAACACAATCATGAGCTTAGGATTGTTGCATGCATCCAAAAGACACACCAAATGATTCATATAAAAAACGTGCTCCAGTTATGTTCGCCTTGTCCAGAGAACACACTAGTGGCAGATATTTTGCATCTGATGGAGCTAGTTGGAAGGTCCACTCCCATTTTCATTGCACATAGACTTCAGCAAAAGGTGGGGTCCTCCTACAACTACTCTGGAGAACTCATTGTCACCTTTGACCTTTTTGAACGTGACTATGCTGGTTCTGCCACCGCCAACACCTACACTGCCATATCCCCAAGGCCACTGATGCATGAAGATGTTTGTCACATGGCATTGGACAAAAATGCAGCCCTTATAATCCTTCCATTTCATGTCAAATGGGGAGGGGATGGTTCAATTGAGTCAGAGGACAGCAACATAAGGGCATTTAACTCCAGGGTTTTGGAAAGGGCACCTTGCTCCATTGGGATTCTTGTGAACCGTGGTCCTTCTGGCTTCAACTCAGCAAATTACAATGTGGCCATGGTTTTCTTGGGAGGACCTGATGATAGAGAGGCTTTGTGCTTGGCTAAGAGGTTTACCAAAAACCTTGACAACAAGTTGTCTGTGTATAGGTTGGTTGCATATGACCATGATATGTCCAATTGGGAACACATGATGGATGATGAGGAGTTGAGGGAGGTGCGTGGAACTTATGGAAAACTAGAAAATGTGACATATGAAGAAAGGAGTATAGAAGATGCATCTCAGACAACGGTTTTCATCAAAGATATAGCTAACAAATTTGATTTTATCATAGTTGGGAGACGCTACGGAATGAGATCTTCTCAAACGTTTGGGTTGGAAAATTGGACTGAATATTCGGAGTTGGGGGTCGTTGGTGATTTGCTTGCTTCACCTGATATGGAGACTACGGCTTCAGTTTTGGTTGTGCAACAACAGTCAACATCTGTAAAATAG 2376 0.4415 MNSTRTIFSSATLVVAIPYSRREIFNVCMDQPMKIISDGVWNYPNGALPSQSAFTMLELQIVIIFAVTQAFHFILKRLGFPYFVSQVMAGFLLGPSIPTGPFEEYKEMLFPFGSADILNTVSSLGYSFFLFITAVQMDLSLITKTGKKAWVIALSSYFISLGLGFSVMCLAAPQLKLVVEDYNSLSSLPMVIITQGGVSFAVVSTLLNDLGILNSELGRLALSTAFVNDLTGGILVGFGSDFMKSIKLEFSDQITNLVVFFVYLICVPLIGRPMMKWIVKNTPEGKPVNKIYIYAIIVTFLGLGFFAGYFNQPFLVGAVIVGLAVPEGPPLGSELVSQLQLFSNWFLSSIFVTCCTMKVDLKDCGPFSFFITVSFFILLAQLIKMLLCMGICRYCKMPFSDGFCLALILSCKGVVDICSYVLIFDTVAQNKKVIGVLIVSVLVLGTTSTLGVKALYDPSRKYAGYQKRNIMSLKHNHELRIVACIQKTHQMIHIKNVLQLCSPCPENTLVADILHLMELVGRSTPIFIAHRLQQKVGSSYNYSGELIVTFDLFERDYAGSATANTYTAISPRPLMHEDVCHMALDKNAALIILPFHVKWGGDGSIESEDSNIRAFNSRVLERAPCSIGILVNRGPSGFNSANYNVAMVFLGGPDDREALCLAKRFTKNLDNKLSVYRLVAYDHDMSNWEHMMDDEELREVRGTYGKLENVTYEERSIEDASQTTVFIKDIANKFDFIIVGRRYGMRSSQTFGLENWTEYSELGVVGDLLASPDMETTASVLVVQQQSTSVK* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02917 791 Pfam Sodium/hydrogen exchanger family 62 446 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu6g02917 791 Gene3D - 55 463 IPR038770 -
Lapu6g02917 791 PANTHER CATION/H + ANTIPORTER 28 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02917 Lapu-Chr6 34897480 34902066 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02917 17 783 Antiporter Super Family AT3G44900 35.792 3.49e-151 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02917 K26731 - gmx:100797272 1207.2