Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02904 ATGGAAACAGCAAAGAATGTGGTGGTGATACAGGGTGCATCTAAGATACTTAATTTGAGAGTTTTTTATTGGATTATAAATGCCTTATCACTTGAGCCTGAAGATACTGTGACCCTAGTTGCAATCCTGCATGAGGTTTATACTCCTATGGGGTACAGAATCGCGGTGGATAACCGGTTGGTAGGGGTAAACCAGAGAATGATCGACAAAGAACTTGCAAAGAAGAAAGAAGAGTACCTGAACAACGAGGAGCTTGCTCAGATTGTTAAACAATATGAATCAAATAAGGTTGCATTTAAGATAAAGTTGTTTACAGGATCTTCACCAAGAGATGTGGCTTTAGAAGTGGCCATAGACCTAAAGGCAACTTGGGTGATACTTGACAGGAAAATGAAGAAAGATGAGGAGTTTTTCCTGCAGAGGCTTTCTTGTGGTATATCTATATTAAAGAGTAACGATCGGATTCTTCGACTAAGAGGGCCTTTAAATCTTCCAGATGAAATACCATGCAACAGCCATGAAACATATGATGAAAGCTTACCAAGTGTTCCATATAAACATCTTTTCTACATTGATGTTTTCCCCAAGAGAAAAGTTGAAGATGGCGAACAGAACCAGATACAAAGTAGGCTCTATGAGGAAGGGGGTTGCTCGAATGTTAAAACCAATATTAATGAAAATATATATCAGACAAGTCCTAATCACCTGAGCATGGATGGAACAGAAATAAATAGTAATCAAATGATAGATAGAATAGAAAGAGCTGAGCAAGGCAAGGATCAAGAGCAGATGCAAAGAATGCCCCTTGAGATGGACGGGGACACGACAATTATGATTAAAACTGATCAAACAACTGGTCAGGACATAGCTGATCAACCAAGCCAAGATGAAGAAAAGACAAACAGCTTCTTCCATGGTGAGAATTGGGACTATAGCAATCCAACAAAGAGTGAAGAAATGATTGATCAACCAATAGATGATCCGCTGAGTCAGAATCATGCACAGACATTGAGCATTTTCAGTGGTGCTATATTGGATGGTGGAGAGGAAGAGAAAAGTATTTTGGAAAATTCAATGTGCAATTTCTGCTCTGTCTGCAAAACTAGACGACCTAATGTTGGGTGGCAAAAGGAATTTACTTATGAAGAACTCCTAGCAGCCACAGATGCATTTTCATTGAAGAACTGTCTCTCTGAAAGTGGATCTCTATTCACTTTCAGAGGCCAGCTGGAGGGAGGGAAGAAACTAGTGGTTAAGCAGCATGATGTAGCTAACACTCAGGTAAGGGAGAAAGTGAAGTCAGAAATCCAAACCATCCTCAAAGCTAGACATAAGAATGTGATCATGCTATTGGGTTCATGTACAGCAGAATCTTTCCTGTTTACTGTATATGAGTATGCCTGCAATAGTTCACTTGACAAATATCTATCAAGTAAGACATCATATGAAGAAAGCTCCAGACCACTAACCTGGATAGAAAGGAAAAGAGTGGCAACAGGCCTTGCCAGAGGCCTCAAGTACCTACATGAGAACAACATTGTTCATTGTAATATAAAACCAAGCAATATTCTTCTAACACATGACTTCAATTCACTGATTGGAGATTACAACTTTGGGAAAGGACATGAATTGAAGTCCTACAAAACTAAAAACAAAGAGAATTATGAATACTTAGCACCAGAATACCAGGAGAAAGGAAAATTATCATCAAAGGCAGATGTATACTCATTTGGTGTGGTTATTTTAGAGTTGATCACTGGGCGAAGGACTACGGATTTCACGTCAGAATATAAAAGCCTTGTTGAATGGGCAAAGCCTCTACTTAAAAAGAAGAATTACTCAGAATTGGTGGATCCTATAATCAGAAATTCATACGAAGAGGATCACCTTGGTTGGCTCGTCCAAGTAACAACACAATGTTTGAAAAAGAATCCTAAGGAAAGGTTATCAATGAATATGGTTGTTTCTGCATTACAAGGCATAGAAGACAGTGAGCTCTGCCACATGACAGAATATATTACTCCAGCTATATCAGATTCGAGAATTGTGCCAGAAATAAATGGTTCTCAAGGTCCAACAATAACCAAAGCTGATCAGCCAAATCAGGAAGTCGAGCAAATTGAGAGCATATTCTGTGGGGACAAAAATAAGTTAAGACTACCAGTTGAGAATAATCTCTTTTACATGGCAGACCAGAGAAACTCTGATAAACTGATACATAATGAAGAACGGATGCAAAGCAGGTCCCAAGGGGAGGAGAAGAGCTCAGGAAAGATGATAACCAATGACCACAGCATGGACAAGACAGGAGTTGATAAGCTGAACGAGTTTGAAGAACAGATTTCAAGTACTCTCCATATGGAGGCTATCACAACACAAAAAATTAGTGTTGATGGCATAATGGGTCACACAAAAGTTGACCAACTGAGCCAAGATCAAGAAGGAAATAGCTTTGCTGAAATGGAGATAGGCTTAATACCAGCAACTATCAGTGCCATGATAGATCAAACAGAAGTTGATCAGCTGGTCTATGATAAAACACAAACGCAGAGAAGCTGCCATGAGAACATACAGGATGGATATCAAGGTGAAATAATTATAGAGAATTCGAAGTCCTCTGCATGCTCTGTTTGCAGAAGTAGACGACTAAACAATGCATGGTCAAAAGACTATTCTTATGATGAACTTTTAGAAGCTACAGAAGGATTTTCCACAGAGAACTCTCTATCAGAAAATGAAGATGGACCTACTTTCGAAGGCTTGTTAGAGAGACAGGTAAACATAGTTGTTAAGAAATATCAAGTTAATACCTCCCAAGAAGAGAAGATCATAAGATCACAAGCAAAGTTGCTCATCAGCGCTAGACATAAAAATGTGGTCATGCTGTTGGGTTTATGCACAAATAAAAGCCAACTTATGGTTGTGTTTGAGAAAGTATGCAACGGTTCACTTGACCAGTACCTAACAAGGGGAAATTTCCAGTCATTGACTTGGAAGCAAAGGCTTAAGGTAGCAATGGGTACTGCCAGAGGTTTAAAGTACCTACATGGGAAAGACATAATCCATGGAAATATAAAACCAAGCAATATTCTTGTAACACATGAGTTTGAACCACTGATTGGAGATTTCCACTTCGGAGAAGATAAAGTTGGACGAAAGAAATCCACCAAAGATAAAAGTGTAAGAAATTCTGGATATGTAGCACCTGAGTACATGGAGAATGGAAAACTATCAAATAAGACAGATATCTACTCCTTTGGAGTGGTTCTTTTGGAGCTGATCAGTGGCCGGAGGGCTACGGACAAATTACCAGGTGGAAAAAGTCTTGTTAGCTGGGCCAGGCCCCTACTCAGAGGAAAGAAGTACCCACAGTTGTTGGATGTGAAAATCAGTAACTCCTATGAAGAAGAAAAACTTGTATGGTTGGTCCAAGTAACAGAACAATGTCTCAGAAAGAATCCTAAGGAAAGATTTACAATGAATATGGTTCTATCTGCCTTGCAAGGCCTAGCAGAATCAGCTGAGTGTTGCGTAATTGAAGAATCGTCTCTAGAAAAGTCATATGTAAATGGTCTTGCCATGATTAGTACACAAGGTCCAATGAAGGCTGATCCAGTGCAGAAGCAGGAACAAGAACGGATTGACAGAAACCAATACAAAGAGGAAAGCAGCCCACAATTAACAGTGAAAAAAAATCACAAGATAGATCGTAGAAAAGAAAATCAGATGATACAGGGTGGAGAAGATGTGCTGAGGAGTCCCTATGAGGAAATGTTCAGAATAACAGCTATCAGCAATGACATGATTGATCAGATAAACCCTGACCAGCAAATCCAGGAAAATCTGCACATTAAGGGAAACTTTGACATAGAAGAAATGGGTAAAAAAGTGGATAAGCAACAAAAGGTGTGCAAGGATAAGAAACAAATACAGGGAAACTGTAATGATAGTTTATTGAATGGGAATGAAGGCAAAATCATTTTGGAAAATTCAAAGTCTTCTGCTTGCTCAATCTGCAAAAGTAGGCGTCCAGACAGTGAATTGCAAAGGAAATACACTTATGAAGAGCTTGAAGCTTCTACAGAAGGATTTTCAGTTAAGTACTCTCTATGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCATGAAATAGTTATTAAGCAACACGCATTCACAAGCTTACTGGAGCAGAAGCTGTTCATGTCAGAATTCCAGTTGCTTATAAATGCCAGACATGAAAACGTGATCATGCTGTTGGGTTCATGTATACGATTAAGTCAATTGCTGATTGTATATGAGAAGGCATGCAACGGTTCACTTGACCAGTACTTATCAAGAGAAAGTGGTAGAACACTGACTTGGGGAGAAAGGCTGAAAGTAGCAATAGGAGTTGCCAGAGGTCTAAAGTATCTACATGAGAATAATATAGCACATGGAGGAATAAAACCAAGTAATATTCTTCTAAATCATGAGTTCAAACCACTGGTAGGAGACTTTGTGTTTGGAAAAGAAAGATGTGAATTGAAGAATATCTGCAGACTTAAAAGTATGAGGAATTGTGGACGAACTGCACCAGAGTGTCAGGAGAGTGGAAAACTGTCGACTAAGGCAGATGTATACTCTTTTGGTATAATTCTTGTGGAGTTGATCACCGGCCGTATGATTACAGAAAAAGTATCAGGAAAAAAATGTCCTATTGAATGTATAAGGTCACTTCTTGAAGGACGAAAGTATCTACAGTTGGTAGATCCCAGAGTCAGCAGCTCCTATGATGAACAAGAACTAGTTTCATTGGTCCACGTAATAGAAAATTGTCTGAGAAAGAATCCAAAGGAAAGGTTCACAATGAATATGGCTGTCTCTGCACTGCCATCTGTAGTAGATTGCAATGACATATATGTAAAGGGCTTTTCACCAGAAAACTCGAATGTTTCAGAAGTAACAATTTCAAAAGTTGAAGAGGAGCAGGTAAATGAAGAAGATTTAGGCATGGAGAATAGTGAAGAAAGAGAGGACAACATGACTTGTAGTGGAGGTAATGAAACAGAAGTATGTCAAGGGTGTGACAGCAACACAACTTGTGAAAATAGTAAGGAAACAGAAGAAAAAGAAAGCTTAAGCACCAAGGTATGTTGGGAAGGGTGCTTATCTTATGGAGGAGCTAAAGAGTTTTATCTCGAAGGGGTCAAAGAGTACACAGCATGTGAAGAATTTTTTGGCTGGTGTGATTTCATTTGA 5253 0.391 METAKNVVVIQGASKILNLRVFYWIINALSLEPEDTVTLVAILHEVYTPMGYRIAVDNRLVGVNQRMIDKELAKKKEEYLNNEELAQIVKQYESNKVAFKIKLFTGSSPRDVALEVAIDLKATWVILDRKMKKDEEFFLQRLSCGISILKSNDRILRLRGPLNLPDEIPCNSHETYDESLPSVPYKHLFYIDVFPKRKVEDGEQNQIQSRLYEEGGCSNVKTNINENIYQTSPNHLSMDGTEINSNQMIDRIERAEQGKDQEQMQRMPLEMDGDTTIMIKTDQTTGQDIADQPSQDEEKTNSFFHGENWDYSNPTKSEEMIDQPIDDPLSQNHAQTLSIFSGAILDGGEEEKSILENSMCNFCSVCKTRRPNVGWQKEFTYEELLAATDAFSLKNCLSESGSLFTFRGQLEGGKKLVVKQHDVANTQVREKVKSEIQTILKARHKNVIMLLGSCTAESFLFTVYEYACNSSLDKYLSSKTSYEESSRPLTWIERKRVATGLARGLKYLHENNIVHCNIKPSNILLTHDFNSLIGDYNFGKGHELKSYKTKNKENYEYLAPEYQEKGKLSSKADVYSFGVVILELITGRRTTDFTSEYKSLVEWAKPLLKKKNYSELVDPIIRNSYEEDHLGWLVQVTTQCLKKNPKERLSMNMVVSALQGIEDSELCHMTEYITPAISDSRIVPEINGSQGPTITKADQPNQEVEQIESIFCGDKNKLRLPVENNLFYMADQRNSDKLIHNEERMQSRSQGEEKSSGKMITNDHSMDKTGVDKLNEFEEQISSTLHMEAITTQKISVDGIMGHTKVDQLSQDQEGNSFAEMEIGLIPATISAMIDQTEVDQLVYDKTQTQRSCHENIQDGYQGEIIIENSKSSACSVCRSRRLNNAWSKDYSYDELLEATEGFSTENSLSENEDGPTFEGLLERQVNIVVKKYQVNTSQEEKIIRSQAKLLISARHKNVVMLLGLCTNKSQLMVVFEKVCNGSLDQYLTRGNFQSLTWKQRLKVAMGTARGLKYLHGKDIIHGNIKPSNILVTHEFEPLIGDFHFGEDKVGRKKSTKDKSVRNSGYVAPEYMENGKLSNKTDIYSFGVVLLELISGRRATDKLPGGKSLVSWARPLLRGKKYPQLLDVKISNSYEEEKLVWLVQVTEQCLRKNPKERFTMNMVLSALQGLAESAECCVIEESSLEKSYVNGLAMISTQGPMKADPVQKQEQERIDRNQYKEESSPQLTVKKNHKIDRRKENQMIQGGEDVLRSPYEEMFRITAISNDMIDQINPDQQIQENLHIKGNFDIEEMGKKVDKQQKVCKDKKQIQGNCNDSLLNGNEGKIILENSKSSACSICKSRRPDSELQRKYTYEELEASTEGFSVKYSLCEGEYGPAFRGQLENNHEIVIKQHAFTSLLEQKLFMSEFQLLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDQYLSRESGRTLTWGERLKVAIGVARGLKYLHENNIAHGGIKPSNILLNHEFKPLVGDFVFGKERCELKNICRLKSMRNCGRTAPECQESGKLSTKADVYSFGIILVELITGRMITEKVSGKKCPIECIRSLLEGRKYLQLVDPRVSSSYDEQELVSLVHVIENCLRKNPKERFTMNMAVSALPSVVDCNDIYVKGFSPENSNVSEVTISKVEEEQVNEEDLGMENSEEREDNMTCSGGNETEVCQGCDSNTTCENSKETEEKESLSTKVCWEGCLSYGGAKEFYLEGVKEYTACEEFFGWCDFI* 1751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02904 1750 MobiDBLite consensus disorder prediction 743 768 - -
Lapu6g02904 1750 Gene3D Phosphorylase Kinase; domain 1 1327 1438 - -
Lapu6g02904 1750 Gene3D Phosphorylase Kinase; domain 1 358 466 - -
Lapu6g02904 1750 Gene3D Phosphorylase Kinase; domain 1 866 977 - -
Lapu6g02904 1750 ProSiteProfiles Protein kinase domain profile. 1364 1631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02904 1750 SUPERFAMILY Protein kinase-like (PK-like) 1349 1626 IPR011009 -
Lapu6g02904 1750 FunFam Proline-rich receptor-like protein kinase PERK8 353 466 - -
Lapu6g02904 1750 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 467 671 - -
Lapu6g02904 1750 Gene3D Transferase(Phosphotransferase) domain 1 979 1189 - -
Lapu6g02904 1750 Gene3D Transferase(Phosphotransferase) domain 1 468 674 - -
Lapu6g02904 1750 Gene3D Transferase(Phosphotransferase) domain 1 1441 1641 - -
Lapu6g02904 1750 MobiDBLite consensus disorder prediction 1200 1228 - -
Lapu6g02904 1750 MobiDBLite consensus disorder prediction 1206 1228 - -
Lapu6g02904 1750 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 979 1178 - -
Lapu6g02904 1750 FunFam Proline-rich receptor-like protein kinase PERK8 1326 1439 - -
Lapu6g02904 1750 ProSiteProfiles Protein kinase domain profile. 903 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02904 1750 Pfam Protein tyrosine and serine/threonine kinase 915 1166 IPR001245 GO:0004672|GO:0006468
Lapu6g02904 1750 Pfam Protein tyrosine and serine/threonine kinase 1367 1626 IPR001245 GO:0004672|GO:0006468
Lapu6g02904 1750 MobiDBLite consensus disorder prediction 285 308 - -
Lapu6g02904 1750 MobiDBLite consensus disorder prediction 1662 1683 - -
Lapu6g02904 1750 Pfam Protein kinase domain 413 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02904 1750 SMART serkin_6 1364 1631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02904 1750 SMART serkin_6 903 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02904 1750 SMART serkin_6 391 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02904 1750 SUPERFAMILY Protein kinase-like (PK-like) 375 679 IPR011009 -
Lapu6g02904 1750 PANTHER OS01G0253100 PROTEIN 796 1173 - -
Lapu6g02904 1750 ProSiteProfiles Protein kinase domain profile. 391 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu6g02904 1750 SUPERFAMILY Protein kinase-like (PK-like) 887 1170 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02904 Lapu-Chr6 34361170 34375860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02904 379 681 Trihelix Transcription Factor Family AT5G38560 37.188 2.07e-55 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lapu6g02904 PK_Tyr_Ser-Thr 3.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02904 - - gsj:114401847 2508.41