Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu6g02893 | ATGGGGATTCAGACAATGGGATCTCAAGGTAATGGGCAACAGTCTCATTTACAGCCTTCATCCTTGTCTAGGCAAGGTTCATGGTATAACCTTACTCTTGATGAGGTTAATAGTCAATTAGGAGACCTAGGGAAGCCATTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGTAAGTCTTCGGTGATAGGCGTGGATAGTGAGAACATGTCGTCCTCTTCCTCGCTTCAACGGCAGGCCAGCCTGACGCTGGCTCGTGCGTTGAGTGGGAAGACTGTTGATGATGTGTGGAGGGAAATTCAACAAGGTCAGAAGAAAAGGTATGGAGAGGAAATGAAAACTCCGGAGGGAGAAACGACTCTTGGTGAGACCACCTTGGAAGATTTCTTGGTGCAAGCAGGTCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTTGGATTGGACACAATGGATTTCTCCACCGCTCAAGGTTTCCAGCAGAAAACGGGCTTGTCATCCTCCCCTTCTATTGGAAGTTTATCAGACACGAGACCGGGCAGAAAAAGGGATGCTCCTGATGCATATGAGAAAACTCTGGAAAGGAGGTTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCAAGGTCACGAGCTCGTAAACAGGCTTACCATAATGAACTGGTTGGCAAGGTTTCCCGTCTAGAAGAAGAAAATGTAAAGCTAAAGAAAGAGAAGATGCAGGAAATCATAACCCTGATATTGAACAAAATTATAAATACGGTATTACAAGAGAGGGGGACATATTTTTTTTGGAGTACTCATGGAACCTAG | 831 | 0.4525 | MGIQTMGSQGNGQQSHLQPSSLSRQGSWYNLTLDEVNSQLGDLGKPLGSMNLDELLQNVWTAEASKSSVIGVDSENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEEMKTPEGETTLGETTLEDFLVQAGLFAEASISPAVGLDTMDFSTAQGFQQKTGLSSSPSIGSLSDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKEKMQEIITLILNKIINTVLQERGTYFFWSTHGT* | 277 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu6g02893 | 276 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 22 | 246 | IPR043452 | GO:0003700|GO:0045893 | |
| Lapu6g02893 | 276 | SUPERFAMILY | Leucine zipper domain | 201 | 245 | IPR046347 | GO:0003700|GO:0006355 | |
| Lapu6g02893 | 276 | MobiDBLite | consensus disorder prediction | 165 | 181 | - | - | |
| Lapu6g02893 | 276 | CDD | bZIP_plant_BZIP46 | 201 | 243 | - | - | |
| Lapu6g02893 | 276 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Lapu6g02893 | 276 | MobiDBLite | consensus disorder prediction | 165 | 192 | - | - | |
| Lapu6g02893 | 276 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 199 | 253 | - | - | |
| Lapu6g02893 | 276 | Gene3D | - | 199 | 251 | - | - | |
| Lapu6g02893 | 276 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 204 | 219 | IPR004827 | GO:0003700|GO:0006355 | |
| Lapu6g02893 | 276 | Pfam | bZIP transcription factor | 201 | 244 | IPR004827 | GO:0003700|GO:0006355 | |
| Lapu6g02893 | 276 | Coils | Coil | 224 | 251 | - | - | |
| Lapu6g02893 | 276 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 199 | 244 | IPR004827 | GO:0003700|GO:0006355 | |
| Lapu6g02893 | 276 | SMART | brlzneu | 197 | 263 | IPR004827 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lapu6g02893 | Lapu-Chr6 | 33915194 | 33926238 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lapu6g02893 | 21 | 250 | bZIP Transcription Factor Family | AT3G56850 | 44.906 | 1.02e-54 | 177 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | bZIP | Lapu6g02893 | bZIP_1 | 1.1e-11 | CL0018 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu6g02893 | K14432 | - | gmx:100798549 | 419.468 |