Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02891 ATGGATGTTCAAGTGATGAATGTGGAAGGAAGTGGTCATCAGACAAAGGCAGATGATGGGGATGTGGAACCAAGTGACGGTGAAGTTAATAATGCTGAAAACTATGGAACTCATGCTGAGGATGGGATTTCTGAGCCATATGTGGGTATGGAATTTGACACTGTAGATGTTGCTAAGACTTTTTATAATGAATATGCCAAGCACATGGGTTTTAGCTCTAAAGTTGGCCCATATGGTCACTCTAAAGTTGGCGGGGAAAGTTATAGGGAGTTTGTGTGTGGTAGGGAAGGTTTGAAAAAAAGACTAAATGAAAGTTGCAATGCAATGATTAGGATCGAGCTAAAGGGTCAAAATAAATGGGTGGTAACAAAATTAGTGAAGGAGCATAGTCATTCCCTGGTGAGTTCCAGTAAGTCATACAATAATCAGCCAAGTAAGCATTTTTCTAGTGTTGGAAGGACAATGCCTGAAACTTATCAAGGAGTGGGTCTTGTTCCGAGTGGTGTTATGTATGTATCTATGGATGGGAGTCGAGTTTCGAATCAGAATACTCGTGCAATGAAAAATATTCATACTGCTCCTGCTGAACGTAGTCACCCAGTTAAAAATTCCTCATTGATGAATTATACTGTAAGACCTTCTTTGCAAAACCGGACATTGGGGAGGGATGCTCATAATCTGCTGGAGTACTTTAAGAAGATGCAAGCTGAGAATCCTGGTTTTTTCTATGCTATACAACTTGATGAAGACAATAGAATGTCTAATGTCTTTTGGGCAGATGCCAGATCAAGGACAGCATACGGTTATTATGGTGACACAGTTCATCTCGACACAACATACAAAGTAAATCAATATAGAGTGCCATTTGCTCCTTTTACCGGGGTAAATCATCATGGTCAAATGGTTTTGTTTGGTTGTGCACTCCTTTTGGATGATTCCGAAGCATCTTTTGTGTGGCTCTTGAAGACATTTCTGACAGCAATGAATGATTGTCAGCCTGTCTCTATAACTACTGATCAAGATAGAGCCATGCAGACAGCAGTTTCTCAAGTTCTCCCACAAGCCCGCCACTGTATTAGCAAGTGGCATATCTTGAGAGAAGGCCAAGAAAAGTTGGCCCATGTATGTCTTGCGCATCCAAATTTTCAGGTTGAACTTTATAATTGTATTAACTTGACAGAAACCATTGATGAGTTTGAGTCATCTTGGAATTGTATCCTTGATAAATATGAACTCAGAAGAAATGATTGGCTTCAGTCACTGTATAATGCTCGTGCTCAATGGGTTCCAGCATTTTTCCGTGATTCGTTTTTTGCAGCATTATCTCCTACTCAAGGATTTGATGGTTCTTTTTTTGATGGTTATGTCAACCAACAGACGACATTGCCATTGTTCTTCAGGCAGTACGAACGAGCTTTAGAGAGCTGGATTGAGAAGGAAATAGAAGCAGATTTTGAGACAGTTTGCACAACACCAGTTTTGAAGACACCTTCACCAATGGAGAAACAGGTTGCTAATCTTTATACGAGAAAAATATTTTCAAAGTTTCAAGAAGAGCTTGTTGAAACTTTTGTTTATACTGCGAATAGAATTGAAGGAGATGGGCCAAATAGCACATTTAGAGTTGCAAAATTTGAGGATGACCAAAAGGCATACACAGTCACATTAAACCATTCTGAGTTGAAAGCTAATTGTAGTTGCCAGATGTTTGAGTATTCAGGCATTCTTTGCAGACATATTTTAACTGTTTTCACTGTGACAAATGTGCTTACATTACCACCCCATTACATCTTGAAACGTTGGACAAGAAATGCAAAGAACAGTTCTGGATTGGATGAATATACTGGTGAATCACATGCACAGGAGTCTTTGACAGCAAGGTATAGCAATCTATGTAAGGAAGCCATCAGATATGCAGAGGAAGGGGCAGTAACTGTGGAAACATACAATGCTGCAATAAGTGGTATTAGAGAAGGGGGAAAGAAGGTCGCTAATGTGAAAAGAAGTGTTGCCAAAGTTACTCCTCCTAACAATCAAGCCACTGGGACTGCCTATTATGACAGGAAAACTCCCACTCCAACTTCAGATACAACTCCTCTTTTATGGCCACGACAAGATGAAATAATGAGGAGATTTAATCTTAATGATGTTGGTGGTCCTGTTCAATCAGTTGCTGATCTAAACTTGCCACAGATGGCCCCAGTCTCTCTTTACCGAGATGATGGTCCATCTGAAAACATGGTAGTTCTTCCATGCCTAAAATCAATGACTTGGGTAATGGAGAACAAGAACTCAACTCCAGGGAATAAAGTAGCTGTTATCAATCTTAAGTTGCAAGATTATAGCAGGGTTCCGTCCACAGAATCTGAGGTTAAGTTTCATCTTTCTAGAGTTACTTTGGAACCAATGTTGAAGTCTATGGCTTACATCAGCGAACAGCTCTCAACACCAGCTAACAAGGTTGCAGTAATAAATCTCAAGCTTCAAGATACCGAGACAACCTCTGGTGAGTCAGAAGTAAAGTTTCAGGTGTCCCGGGATACATTGGGTGCCATGCTACGATCAATGGCCTATATCCGTGAGCAGCTTTCCCATGCTGACGATGCACCGTCAGAACCTCTGTATAAAAAGCATAAGAAGTAA 2643 0.4037 MDVQVMNVEGSGHQTKADDGDVEPSDGEVNNAENYGTHAEDGISEPYVGMEFDTVDVAKTFYNEYAKHMGFSSKVGPYGHSKVGGESYREFVCGREGLKKRLNESCNAMIRIELKGQNKWVVTKLVKEHSHSLVSSSKSYNNQPSKHFSSVGRTMPETYQGVGLVPSGVMYVSMDGSRVSNQNTRAMKNIHTAPAERSHPVKNSSLMNYTVRPSLQNRTLGRDAHNLLEYFKKMQAENPGFFYAIQLDEDNRMSNVFWADARSRTAYGYYGDTVHLDTTYKVNQYRVPFAPFTGVNHHGQMVLFGCALLLDDSEASFVWLLKTFLTAMNDCQPVSITTDQDRAMQTAVSQVLPQARHCISKWHILREGQEKLAHVCLAHPNFQVELYNCINLTETIDEFESSWNCILDKYELRRNDWLQSLYNARAQWVPAFFRDSFFAALSPTQGFDGSFFDGYVNQQTTLPLFFRQYERALESWIEKEIEADFETVCTTPVLKTPSPMEKQVANLYTRKIFSKFQEELVETFVYTANRIEGDGPNSTFRVAKFEDDQKAYTVTLNHSELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPPHYILKRWTRNAKNSSGLDEYTGESHAQESLTARYSNLCKEAIRYAEEGAVTVETYNAAISGIREGGKKVANVKRSVAKVTPPNNQATGTAYYDRKTPTPTSDTTPLLWPRQDEIMRRFNLNDVGGPVQSVADLNLPQMAPVSLYRDDGPSENMVVLPCLKSMTWVMENKNSTPGNKVAVINLKLQDYSRVPSTESEVKFHLSRVTLEPMLKSMAYISEQLSTPANKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHADDAPSEPLYKKHKK* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02891 880 Pfam FAR1 DNA-binding domain 60 134 IPR004330 -
Lapu6g02891 880 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 665 IPR031052 GO:0006355
Lapu6g02891 880 Pfam MULE transposase domain 274 366 IPR018289 -
Lapu6g02891 880 MobiDBLite consensus disorder prediction 673 699 - -
Lapu6g02891 880 MobiDBLite consensus disorder prediction 1 43 - -
Lapu6g02891 880 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270
Lapu6g02891 880 Pfam SWIM zinc finger 552 586 IPR007527 GO:0008270
Lapu6g02891 880 SMART 26again6 563 590 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02891 Lapu-Chr6 33819494 33835951 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu6g02891 MULE 3.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02891 - - gmx:100786516 1603.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02891 6 33819494 33835951 Lapu6g02891 6 33819494 33835951 ECH