Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02885 ATGAGTTTGAGATGTGGCAGTGTGGTGTTTGTTGCTTTAGTGTTTTTGCCACTCATGGCTTCTGCAGCTTCAATTGTGAAGAACCTTCCTGGTTATGAGGGTGATCTTCCTTTCAAGCTTGAAACTGGATACATAGGAGTGAGAGAAGAAGAAGTGCAGATATTTCATTTATTTGTTGAGTCTCAGAGAAACCCTTCCATTGATCCATTGTTATTATGGTTTGTTGGAGGTCCTGGTTGTTCTGCCTTGTCAGCATTCTTTTTTGAAAATGGGCCTTTATCAATGAATGGCGATTACAGTGGAAACCTTCCAAAACTTGAGTTGAACCCGTATGGTTGGTCACAGACATTGAACATGATATACATAGACATGCCAGTGGGCACAGGATTTTCATACTCAGAAACACAAGAAGGCTATTACAGTAGTGACTCCTTGTGGGTGGACCATACTTATGAATTTCTACAAAAGTGGTTTATTGATCATCCAAAGTTTAACTCAAACCCATTTTACATTGGTGGTGGCTCGTATTCAGGAATGACTACAGGACCTCTTGTTCAAAAAGTATATGAAGGTTATAAAGCAAGACACAAGCCACTCATCAACATCAAAGGTTATGTTCTTGCGAGCCCAGCTGTTGATTGGTATCAAGAAGTGAATGTGAAAGTTTTGTATGCATACCAGAGGAGTCTTATATCTGAAGCACTCTATAAGTCCATCAAAGAAAACTGTAACGATGATTACGTAAACATTGATCCAGAAAACACAAAGTGTGTCTCAGATTATGAAGCTTATTCTGAGCTAGTTCGTTACATAAACGACCAACAAATTCTGGAACCTCTGTGTGTTACTACGCCTGGTTTGAATCGAGAAATTCTACAAGAAGTTCAAGCTCCTCCAACATTTTGGTGTAGAAGCTATTATCATATCCTTGTGGACGCATGGGCAAATGATGAAAATGTGAGGACGGCCCTTCATGTAAGAGAGGGAACCAAAGAGGAATTCCTGAGATGCAACAAGACAATGGCATACACCCAAACTTGGCAAAACTCAGTACAATATTATCGGAATCTCACTAATGCCAACCTTCAAGCTCTCGTTTACTGTAGTGATCTTGACATGAGTATTCCACACCTGGGTACACAATATTGGATCAATTCATTCAACATGACCATACGTGACAAATGGCGTGCATGGTTTGTTGACGGTCAAGTTGCCGGGTACACAGAAATCTATAAAATGAAAGAAGATCACTTCTTTACATATGTGATTGTGAAGGGTGCTGGACATGTGGCACAAACATTTAAACCCAAGGAAGTTTATCATTTGATCAATAGATGGTTTTCATCTTCTCTTATATAA 1359 0.3951 MSLRCGSVVFVALVFLPLMASAASIVKNLPGYEGDLPFKLETGYIGVREEEVQIFHLFVESQRNPSIDPLLLWFVGGPGCSALSAFFFENGPLSMNGDYSGNLPKLELNPYGWSQTLNMIYIDMPVGTGFSYSETQEGYYSSDSLWVDHTYEFLQKWFIDHPKFNSNPFYIGGGSYSGMTTGPLVQKVYEGYKARHKPLINIKGYVLASPAVDWYQEVNVKVLYAYQRSLISEALYKSIKENCNDDYVNIDPENTKCVSDYEAYSELVRYINDQQILEPLCVTTPGLNREILQEVQAPPTFWCRSYYHILVDAWANDENVRTALHVREGTKEEFLRCNKTMAYTQTWQNSVQYYRNLTNANLQALVYCSDLDMSIPHLGTQYWINSFNMTIRDKWRAWFVDGQVAGYTEIYKMKEDHFFTYVIVKGAGHVAQTFKPKEVYHLINRWFSSSLI* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02885 452 FunFam Serine carboxypeptidase-like 19 19 286 - -
Lapu6g02885 452 Pfam Serine carboxypeptidase 30 448 IPR001563 GO:0004185|GO:0006508
Lapu6g02885 452 Gene3D alpha/beta hydrolase 19 289 IPR029058 -
Lapu6g02885 452 Gene3D - 304 450 - -
Lapu6g02885 452 SUPERFAMILY alpha/beta-Hydrolases 26 449 IPR029058 -
Lapu6g02885 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 419 432 IPR001563 GO:0004185|GO:0006508
Lapu6g02885 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 132 IPR001563 GO:0004185|GO:0006508
Lapu6g02885 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 109 121 IPR001563 GO:0004185|GO:0006508
Lapu6g02885 452 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 182 IPR001563 GO:0004185|GO:0006508
Lapu6g02885 452 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 436 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02885 Lapu-Chr6 33490964 33530093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02885 20 47 Calmodulin-binding Proteins AT2G22960 71.429 3.27e-06 45.8