Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02843 ATGGAGAAGTATAACCAACTCTTCTTATCATTATTTAGAAAAATGTTGGTGGCAACGTGCCGTGCCAAACTCCACACAACACCACACATGATGGTATATATATCTCCCGAGTCATCAAATTCACCACAATTAATTCATACAATTTTGATATTCTTGGTGACCCTTTTGTCCATTCGCACACTCTCCAAACGCCGTGGCCGGAAGCTGCCACCGGGGCCAAGAGGGTGGCCTGTGGTGGGTGCACTTCCTCTTATGGGAAGCATGCCCCATGTGACATTGGCAAATATGGCAAAGAAATATGGATCCGTGATGTACCTCAAAATGGGTACTAACAACATGGTTGTGGCTTCTACTCCTGCTGCTGCTCGTGCCTTCCTCAAAACCCTTGATCAAAACTTCTCCAATCGGCCTCCAAATGCTGGTGCAACACACTTGGCTTATGATGCACAGGACATGGTGTTTGCTGAATACGGATCAAGGTGGAAGTTGCTGAGGAAACTGAGCAACCTGCACATGCTTGGAGGAAAGGCTCTGGAGGAGTGGAGCAGGGTTCGGGAGGAAGAGATGGGACACATGGTTGGTACGATGTACGAGTGCAGTAAGAGGGGTGAGGGTGTGGTGGTGCCTGAGATGTTGACCTACTCCATGGCCAACATGATAGGGCAAGTTATACTGAGTCGTCGAGTGTTCGAGACGAAGGGTTCGGAGTCAAACGAGTTCAAGGACATGGTGGTGGAGCTGATGACCGTTGCAGGGTACTTCAACATCGGTGATTTCATACCCTTCTTGGCCAAATTGGACTTGCAGGGCATAGAGCGTGGGATGAAGCAGTTGCACAAGAAGTTTGATGGGTTGCTGACCAGGATGATTGAAGAGCATGTGGCTTCTCAGCACAAGAGGAAGAACAAGCCTGATTTCTTGGACATGGTCATGGCTCATTATGGTGAAGAGGACGCTCACGCCCACAAACTGTCTCTCATCAACGTCAAGGCACTGCTCTTGAACCTATTCACAGCAGGAACAGACACATCTTCAAGCATCATAGAGTGGTCCCTAGCAGAGATGCTGAACAACCCCAGCATCATGAAGAAGGCTCACGAAGAAATGGACCGAGTCATAGGCAGGGAATGCAAAGAGACCTACAGAAAGCACCCTTCAACCCCTCTCAACCTCCCTCGAATCTCCGACCAACCATGCCAAGTTAACGGCTTCTACATCCCTCAGAATACTCGCTTGAGCGTGAACATCTGGGCCATAGGGAGAGACCCCGAAGTGTGGGAGAACCCCTTGGAGTTTAAGCCGGAGAGGTTCTTGAGTGGGAAGAACAGAAGGATCGAGCCACGAGGGAATGACTTCGAGCTGATACCCTTTGGCGCCGGGCGAAGGATCTGCGCCGGGACCAGAATGGGGATTGTGCTAGTGCACTACATTTTGGGCACCTTGGTGCATTCCTTTGATTGGAAGGTGCCGCGTGAAGTGGGGGAGTTGAACATGGACGAGACCTTTGGCCTTGCCTTGCAGAAAAAGGTTCCTCTTGTGGCTTTGGTCACTCCTAGGTTGAACCCCAATGCTTACATTCCTTAG 1584 0.5019 MEKYNQLFLSLFRKMLVATCRAKLHTTPHMMVYISPESSNSPQLIHTILIFLVTLLSIRTLSKRRGRKLPPGPRGWPVVGALPLMGSMPHVTLANMAKKYGSVMYLKMGTNNMVVASTPAAARAFLKTLDQNFSNRPPNAGATHLAYDAQDMVFAEYGSRWKLLRKLSNLHMLGGKALEEWSRVREEEMGHMVGTMYECSKRGEGVVVPEMLTYSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTVAGYFNIGDFIPFLAKLDLQGIERGMKQLHKKFDGLLTRMIEEHVASQHKRKNKPDFLDMVMAHYGEEDAHAHKLSLINVKALLLNLFTAGTDTSSSIIEWSLAEMLNNPSIMKKAHEEMDRVIGRECKETYRKHPSTPLNLPRISDQPCQVNGFYIPQNTRLSVNIWAIGRDPEVWENPLEFKPERFLSGKNRRIEPRGNDFELIPFGAGRRICAGTRMGIVLVHYILGTLVHSFDWKVPREVGELNMDETFGLALQKKVPLVALVTPRLNPNAYIP* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02843 527 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 SUPERFAMILY Cytochrome P450 70 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 Gene3D Cytochrome P450 55 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Lapu6g02843 527 PRINTS E-class P450 group I signature 121 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 Pfam Cytochrome P450 70 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02843 527 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 48 516 - -
Lapu6g02843 527 FunFam Flavonoid 3',5'-hydroxylase 2 61 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02843 Lapu-Chr6 32015306 32024053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02843 44 525 Cytochrome P450 AT5G07990 44.488 2.17e-159 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02843 K13083 - gmx:547705 832.017