Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02823 ATGAAGAAGCTTTCTCTTTATACTTGTTTACTCAATTTGAGTCTCTTGGTTCTTCTTCCCTACAGCAAAGCCAGTCAGGCTGAGAAACTTGATGAGTTGATCCTGTCTAGGAGCTCACAGAAACCTTCTGGTACCCTTTCTTGGGCTGAGAAAGATGCATTGAAAACACATTCTTCTGCTTATGTTGCTCCCCAAGAGGGGCTCAGGCAAGCTGACAAAATTGTGCAATTGCCTGGCCAGCCCTATGGGGTGAATTTTGATCATTATTCAGGCTATGTCACTGTTGATCCAGTGGCCGGAAGAGCACTTTTCTATTACTTTGTAGAGTCTCCTTATAACCCTTCAACTAAACCTTTAGTATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCATTGGGGTATGGTGCCTTTGAGGAACTGGGACCTTTCAGAATAAACTCTGATGGCAGAACACTCTATCGTAACAAATATGCTTGGAATGAAGTGGCTAATGTGCTGTTCTTGGAATCCCCTGCTGGAGTGGGCTTTTCCTACTCAAACACTACGTCAGACTATGATCATGCAGGAGATAAGTCTACTGCTAAAGATGCCTATGTTTTCCTCATCAATTGGCTAGAAAGGTTTCCACAGTACAAAACACGTGATTTCTACATAACTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAGCTTGCATACACTATTCTGCTGAACAAAAAATTCAGTGATCAAAATATTAACCTCAAAGGCATTGCTATTGGGAATGCTTGGATTGATGATGTTACAAGTGTGAAGGGGATATTTGATTACTTATGGACTCATGCTTTGAGCTCAGATCAAACACATGAGTTGATTGAGAAGTACTGCGACTTCACTTCTGAAAAAGTTTCTGCAATATGTGCCAATGCAACAACAACGGCCTTTATTGAGAAAGGAAAGATAGATTCTTATAACATCTATGCTCCACAGTGTCACGATTCTTCTCTCAAAAATGGATCAACTGGTTCTGTAAATGATTTTGACCCATGTTCTGATTTCTACGGGGAAGCCTATCTGAACAGGCCTGAAGTCCAACTAGCTCTTCATGCAAAACCCACAAACTGGAGCCATTGCAGTGGTGATACTGATTCGGTGGTACCAGTCACATCTTCTAGATATTCAATCAACACCCTCAAGCTCCCTATCCAAGTTCCTTGGCATCCATGGTATTCTGGAAACGAGGTTGGAGGGTATGTGGTGAAGTACAAAGGAGTGACCTTTGCTACAGTAAGAGGAGCAGGGCATTTAGTTCCAAGCTGGCAACCCGCACGTGCTCTAACCCTCATCTCCTCATTCCTCTATGGAAGCCTTCCTCCTTCTTCACCATGGAAGGGTTTCTAA 1380 0.4319 MKKLSLYTCLLNLSLLVLLPYSKASQAEKLDELILSRSSQKPSGTLSWAEKDALKTHSSAYVAPQEGLRQADKIVQLPGQPYGVNFDHYSGYVTVDPVAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGRTLYRNKYAWNEVANVLFLESPAGVGFSYSNTTSDYDHAGDKSTAKDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLAYTILLNKKFSDQNINLKGIAIGNAWIDDVTSVKGIFDYLWTHALSSDQTHELIEKYCDFTSEKVSAICANATTTAFIEKGKIDSYNIYAPQCHDSSLKNGSTGSVNDFDPCSDFYGEAYLNRPEVQLALHAKPTNWSHCSGDTDSVVPVTSSRYSINTLKLPIQVPWHPWYSGNEVGGYVVKYKGVTFATVRGAGHLVPSWQPARALTLISSFLYGSLPPSSPWKGF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02823 459 Gene3D - 374 449 - -
Lapu6g02823 459 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Lapu6g02823 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 435 IPR001563 GO:0004185|GO:0006508
Lapu6g02823 459 Gene3D alpha/beta hydrolase 69 326 IPR029058 -
Lapu6g02823 459 Gene3D - 343 373 - -
Lapu6g02823 459 FunFam Carboxypeptidase 68 326 - -
Lapu6g02823 459 SUPERFAMILY alpha/beta-Hydrolases 74 448 IPR029058 -
Lapu6g02823 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Lapu6g02823 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Lapu6g02823 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Lapu6g02823 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 418 431 IPR001563 GO:0004185|GO:0006508
Lapu6g02823 459 Pfam Serine carboxypeptidase 78 372 IPR001563 GO:0004185|GO:0006508
Lapu6g02823 459 FunFam Carboxypeptidase 358 448 - -
Lapu6g02823 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 418 435 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02823 Lapu-Chr6 31165653 31169267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02823 372 449 Calmodulin-binding Proteins AT2G22960 32.911 7.21e-09 53.5