Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02810 ATGGAGAAAACTAGTACTTTGTTTGCCTTCATCCATCTCAATCTCAAACAAATATATTTGTTACCCTTAACAATGGTTGAATCTGCTGATACTGTGATTCCATTATCCTCATCTTCTCTTTCGTCTTGTGATCACACTACTGATAGTGCTGTTGACTCTTCCTCTTTGCAGAAACCTTCATCCTCTACTACTCCTCAGAAAAAACTTGGTAGGCCCTTAGGTTCCAAGAACAAGCCAAAACCATTACTTGTGATTGACAAAGCCAATAAGAATGTTGTAAAACCCATTTTCATTGAAGTGCCAGATAACTATGATGTGATTAAGACAATTGTTCAATTCGCTCGTCACCACCAAGTTAGCATCATAGTACTAAATGCATCAGGAACTGTTTCCAATGTCACTATTCGTCACAATCATTCTCATGCTTCTTCTCTCACTCTTTATGGACCTTTCAAATTAATTTCCCTCACTGGAACCTACATAAATAATACTGCTTTCAATAACTCTTCATCCTTATCATCAACCCTTAATTTTAGCCCTTATTGTTCCTTTAGCATTTCTTGTTTTGGAATTCAAGAACAAAGCTTTATTGGGGTTGTTGGAGGAAAAGTTGTTGCAGAAAATGGAGTTATGGTGGCAGTCAATATTGTCAACAACTTTGAGATTGCCAATGTGTGTCTTGCTGCGTAG 690 0.3725 MEKTSTLFAFIHLNLKQIYLLPLTMVESADTVIPLSSSSLSSCDHTTDSAVDSSSLQKPSSSTTPQKKLGRPLGSKNKPKPLLVIDKANKNVVKPIFIEVPDNYDVIKTIVQFARHHQVSIIVLNASGTVSNVTIRHNHSHASSLTLYGPFKLISLTGTYINNTAFNNSSSLSSTLNFSPYCSFSISCFGIQEQSFIGVVGGKVVAENGVMVAVNIVNNFEIANVCLAA* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02810 229 MobiDBLite consensus disorder prediction 39 70 - -
Lapu6g02810 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 54 221 IPR014476 GO:0003680
Lapu6g02810 229 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 215 IPR005175 -
Lapu6g02810 229 MobiDBLite consensus disorder prediction 39 80 - -
Lapu6g02810 229 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 219 - -
Lapu6g02810 229 CDD DUF296 94 206 IPR005175 -
Lapu6g02810 229 ProSiteProfiles PPC domain profile profile. 90 223 IPR005175 -
Lapu6g02810 229 Gene3D - 93 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02810 Lapu-Chr6 30524763 30532130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02810 66 219 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.395 1.24e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02810 - - vun:114188375 249.21