Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02804 ATGCCTCATGTCACACTCACAAACATGGCCAAGAAATTTGGACCCATCATGTTCCTCAAAATGGGTACTTGTGACACTGTGGTTGCCTCAAGCCCAGATATAGCCCAAGCATTTCTCAAGGCCTTGGACCATAATTTCCTAAACAGGCCCACAATTGCTGGAGCAACCCACTTGGGGTATAATGCACAAGACCTAGTTTTTGCAGATCATGGACCCAAATGGAAGCTCCTTAGGAAGCTAACCAACCAACACATGCTTGGTGGGAGGGCCCTTAATGATTGGGCCCATGTGAGAGCAAGTGAGGTGAAACACATGGTGAAAGCCATCCAAGTGACACTTAGCCAAAGAATATTTTCAAAGAAAGGGTTGGAGTCTAAGGAGTTTAAGGACATGGTGGTGGAATTCATGAGAATTTCTGGGGTGAACATTGGTGATTTTGTACCTTGCATTGCTTGGATGGACTTGCAAGGTGTGAATTTGTTCACTGCAGGGACAGACACATCAACTAGCATCATAGAATGGGCACTAGCAGAAATGTTGAAAAAGCCCGATGTTTTTATTAGGGCACAGAAAGAGATGGATGAAGTAATAGGAAGGCAAAGACTAGTTCTTGAATCTGACCTACCCAAATTACCATACCTTGAAGCAATCTGCAAGGAGACATATAGGATGCACCCATCTACACCCCTTAGTGTTCCCAGGGTTGCAACTGAAGCATGCAATGTGAATGGATACTACATCCCCAAGAACACAAGGCTAAATTTCAATCCAGAGAGGTTTCTTAGAGGGAAGAGTGCAAAAGTTGATCCTAGTGGAGTTGATTTTGAGTTGATTCCCTTTGGAGCTGGAAGGAGGATTTGTGCAGGATATAGAATGGCCATTGTGGTAATTGAGTACATTTTGGGTACTTTGGTGCATTCTTTTGACTGGAAGTTGCCAAATGGTCAAGAGCTAAACATGGATGAGGCCTTTGGACTCACTTTGCAGAAGGCAGTGCCTCTCTCAGCCATGGTTACCCCTCGTTTGGTCCCAGATGCTTATGTTTGA 1047 0.4451 MPHVTLTNMAKKFGPIMFLKMGTCDTVVASSPDIAQAFLKALDHNFLNRPTIAGATHLGYNAQDLVFADHGPKWKLLRKLTNQHMLGGRALNDWAHVRASEVKHMVKAIQVTLSQRIFSKKGLESKEFKDMVVEFMRISGVNIGDFVPCIAWMDLQGVNLFTAGTDTSTSIIEWALAEMLKKPDVFIRAQKEMDEVIGRQRLVLESDLPKLPYLEAICKETYRMHPSTPLSVPRVATEACNVNGYYIPKNTRLNFNPERFLRGKSAKVDPSGVDFELIPFGAGRRICAGYRMAIVVIEYILGTLVHSFDWKLPNGQELNMDEAFGLTLQKAVPLSAMVTPRLVPDAYV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02804 348 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 280 289 IPR017972 GO:0005506|GO:0016705
Lapu6g02804 348 Pfam Cytochrome P450 158 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 Pfam Cytochrome P450 1 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 Pfam Cytochrome P450 254 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 Gene3D Cytochrome P450 1 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 PANTHER CYTOCHROME P450 98A9 2 110 - -
Lapu6g02804 348 Gene3D Cytochrome P450 157 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 PRINTS P450 superfamily signature 278 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 PRINTS P450 superfamily signature 163 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 PRINTS P450 superfamily signature 216 227 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu6g02804 348 SUPERFAMILY Cytochrome P450 2 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02804 Lapu-Chr6 30291238 30294536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02804 93 347 Cytochrome P450 AT5G07990 41.696 1.08e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02804 K13083 - egr:104433881 440.654