Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02801 ATGACCCTAGCTATTGTGGGAGAGGCTCTTATCTCTGCTTGTGTGGAGATCTTGATAAAAAAGATAGCTTCTAGAGCGTTTCGAGATTTCTTCTCCAGTAGAAAGCTGGATATTTCTTTGTTGGATGAGTTGAAGATAAAGCTGTTGGCACTTAATGCTGTGCTCAATGATGCTGAGGAGAAGCAGATCACTGATACTGCAGTGAAGGAATGGCTGGATGAGTTGAGAGATGTTGTCTTGGATGCAGAAGATTTGTTGGATGAAATCAACACACATGCTTTGAGATGCAAGAGGAAGGGAGAATCTATAACATTTGCTACCCAGGTCAGATCTTTCCTTTCTTCTACTTCTAGCTTTAAGAACTTCTACAGGCGTATGAATTCCAAGTTTGTAGCAATATCTAGAAGGCTAGAACATTTTGTTAGACAAAAGGATATTCTTGGCTTGCAAAGTGTTACTAGGAGAGTCTCCTACAGAACAGTAACAGATTCATTGGTTGAATGTGTTGTGGTTGCTAGAGAGAACGACACGGAGAAGCTACTGAGCATGCTTCTATGTGATGATGGCGATGGCATGTCTAATGATATAGAAGTTATCTCAGTATTGGGCATGGGGGGTCTGGGAAAAACAACCCTTGTTCAGTGCCTTTATAATGATAGTGAAGTGCAGAAACATTTTGATTTGACAGCTTGGGCTTGTGTGTCACATGATTTTGATATTCTCAAGGTAACCCAGAAAATTGTTGAATCTCTCACATCGAAAGATTGTCAAATTACTAATCTTGATGTTCTTCGTGTTGAATTGAATAATAACCTAAGAGATAAGAAATTTTTGCTTGTGCTTGATGACCTTTGGAATGAAAAGTATAACGATTGGCATCACCTAATAGCACCTTTTAGAAGTGGGAGAAAGGGAAGTAAAATCATTGTGACAACCAGACAACAAAGAGTTGCACAGGTTACACATACATTCCCCACCTATGAGCTGAAACCTCTTAGTGATGAAAATTGTTGGCGCATACTAGCCAGACATGCATTTGGAAGTGAAGGTTACCACAATTATCCAATCCTAGAAGAAATTGGTAAAAAAATTGCAAGAAAGTGTAATGGTCTACCATTGGCAGCTAAAACATTGGGAGGCCTTTTGCGATCAAATGTTGATGTTGGGGAATGGAATAGAATTCTGAATAGCAATTTGTGGGCACATGATGATGTGTTACCAGCTTTGCGTATAAGTTATTTTCATCTTCCAGCACATTTGAAAAGATGTTTTGCTTATTGCTCTATTTTTCCAAAACAACATTTGTTGCATAGGAAGGAATTGATTCTGTTATGGATGGCTGAAGGCTTTCTTCAACATATCCATGAAGAGAAAGCAATGGAATCAGTAGGTGATGACTGCTTTAATGAGTTATTATCTAGATCCTTAATTCAAAAAGACAATGCTATTGAAGAGGAAAATTTTCGAATGCATGATCTCATTTACGATTTAGCTAGACTTGTGTCTGGAAGAAGTTCTTACTACTTTGATGGCAGAGAAATCCCAAGAACTGTTCGCCATTTATCATTTCCCAGAGAGATGTTTGATATCCCTGAAAAGTTTAAGGGCTTGTATGAGCTGAAGTGTTTGCGGACGTTTCTACCACGATTGTCATATCCATATGAACAATTTTACTTAACCAAAATGGTATCACATGCTTGGTTGCCAAAGCTAAGATGCTTGCGAATACTTTCATTGTCTAAGTACTCAAATATCACTGAGTTGCCTAATTCGATTGGTGATTTGTTGCACCTGAGGTATCTGGATCTTTCCTACACTTCCATTGAAAGCTTGCCCAATGAAACATTTACGCTTTACAATTTGCAAACTTTGATATTATCAAATTGTGAATCCCTTATTCATTTGCCACAGAAGATAGGAAATCTGATTAACTTACGCCACCTTGACATCAGTGATACTAAATTGCCGGAGATGCCAACACAAATCTGCAAATTACAAGAACTCCGTACCTTGACAGTTTTTATTGTTGGAAGAGAAGATGGACTAAGTATCAGAGATTTATCAAAATTTCCTTTTCTGCAGGGCAAGCTTTCCATTATGAACCTGCAAAATGTTGCCAATCTTGTGGATGCTTTTCAGGCGAATTTAAAGAACAAAGAGCAGATCGAGGAGCTTATTCTAGAATGGGGCAGTGATCCACAAGAACCGCAGTTCGAAAAAGATGTACTTGACAACTTGCAACCATCAACAAATTTGAAGAAACTCAATATCAAATATTATGGTGGCACTACCTTTCCAAATTGGATAGGACATTTTTCATATTCAAAGATCATAGTCATTAATATTAGTGATTGCAACAATTGCTTGTCACTTCCACCGTTTGGACAACTACCTTCCCTGAAGGAGCTTGTCATCAAAAGGATGAAAATGGTGAAGAAAGTTGGTCACGAGTTCTACGGCAGCAATGTAGGCTCACAGTTGTTTCAGCCATTTCAATCACTAGAGAGTCTGGAATTTGAAGATATGTCAGAGTGGCAGGAATGGCTACCATTTGAGAGTGAAGGCAGAATCTTTTCTTTTCCTTGTCTTAAGACTTTGTACCTGTACAAGTGCCCCAAGCTAAGAGGAACCTTGCCAAGTCATCTACCTTCATTAACAAATGTGATTTTCTCAGAGTGCAACCAGCTGGTGACAAAATTATCTGATGTTCATTGGAATACATCAATTGAAGTAATACATATTAGAGAGGGACAAGAAGCCTTGTTGTCTATGCTTGACAACTTCTCTTATTGTGAACTATTGATTGAAAAGTGTGATAGCTTGCAGTCTTTGCCCAGAATGATACTTAGTGCAAATTGTCTTCAAAAGTTGACTCTTATAAATATCCCATCTTTGATTTCCTTCCCAGCTAATTGTTTGCCAACATCATTGCGATCACTTGACATATGTCATTGTAGAAAGTTAGAGTTCTTATCTCACAATACATGGCACAAATTCACATCACTTGAACTACTGAGAATATGGAACAGTTGCAGTTCCCTGACATCTTTTTCATTAGCTTGTTTACCTGCCCTTCAAGAGCTTTATATCCGTTTTATTCCCAACTTGGAAGCAATTACTACTCAAGGTGGAGAAGCACCTCCCAAATTAGTTGATTTTATTGTCACTGATTGTGAGAAATTTAGATCACTGCCAAATCTAATTGATCTCCCTTCCCTTGAACACTTGGACCTATCCGGGCTTCCGATGCTAGAATTACTGTCTCCAAGGTGTTTGCCTTCTAGTTTAAGATCCCTTTACTTTGATGTTGGAATACTATCATCTATCTCCAAACAAGAGTTGGGTTTGCTATTCCAACCCTTATATTCTCTGTCACATCTTTTAGTCAAGGGTCTTGGTGATGAAGATCTTCTTAACACTCTTTTGAAGGAGCAGTCCCTGCCTACTTCTCTAGAATATCTGATCCTACATAATTTCAGTGGTTTAAAGTTGTTGGAAGGAAAAGGGCTTCGAAATCTCACTTCTCTCCAAATGCTTCACATGTACAACTGTCCAAGTTTTGAGTCCTTACCTGAGGATCATCTTCCTTCCTCTCTTCTAGTACTCAGTCTGAGGGAGTGTCCTTTACTGGAAGCAAGGTATCAAAGTCAGAATGGGAAATACTGGTCAAAAATTGCTCACATTCCTGCAATCAAGATAAATGAAAAAGTCATAATATGA 3720 0.3841 MTLAIVGEALISACVEILIKKIASRAFRDFFSSRKLDISLLDELKIKLLALNAVLNDAEEKQITDTAVKEWLDELRDVVLDAEDLLDEINTHALRCKRKGESITFATQVRSFLSSTSSFKNFYRRMNSKFVAISRRLEHFVRQKDILGLQSVTRRVSYRTVTDSLVECVVVARENDTEKLLSMLLCDDGDGMSNDIEVISVLGMGGLGKTTLVQCLYNDSEVQKHFDLTAWACVSHDFDILKVTQKIVESLTSKDCQITNLDVLRVELNNNLRDKKFLLVLDDLWNEKYNDWHHLIAPFRSGRKGSKIIVTTRQQRVAQVTHTFPTYELKPLSDENCWRILARHAFGSEGYHNYPILEEIGKKIARKCNGLPLAAKTLGGLLRSNVDVGEWNRILNSNLWAHDDVLPALRISYFHLPAHLKRCFAYCSIFPKQHLLHRKELILLWMAEGFLQHIHEEKAMESVGDDCFNELLSRSLIQKDNAIEEENFRMHDLIYDLARLVSGRSSYYFDGREIPRTVRHLSFPREMFDIPEKFKGLYELKCLRTFLPRLSYPYEQFYLTKMVSHAWLPKLRCLRILSLSKYSNITELPNSIGDLLHLRYLDLSYTSIESLPNETFTLYNLQTLILSNCESLIHLPQKIGNLINLRHLDISDTKLPEMPTQICKLQELRTLTVFIVGREDGLSIRDLSKFPFLQGKLSIMNLQNVANLVDAFQANLKNKEQIEELILEWGSDPQEPQFEKDVLDNLQPSTNLKKLNIKYYGGTTFPNWIGHFSYSKIIVINISDCNNCLSLPPFGQLPSLKELVIKRMKMVKKVGHEFYGSNVGSQLFQPFQSLESLEFEDMSEWQEWLPFESEGRIFSFPCLKTLYLYKCPKLRGTLPSHLPSLTNVIFSECNQLVTKLSDVHWNTSIEVIHIREGQEALLSMLDNFSYCELLIEKCDSLQSLPRMILSANCLQKLTLINIPSLISFPANCLPTSLRSLDICHCRKLEFLSHNTWHKFTSLELLRIWNSCSSLTSFSLACLPALQELYIRFIPNLEAITTQGGEAPPKLVDFIVTDCEKFRSLPNLIDLPSLEHLDLSGLPMLELLSPRCLPSSLRSLYFDVGILSSISKQELGLLFQPLYSLSHLLVKGLGDEDLLNTLLKEQSLPTSLEYLILHNFSGLKLLEGKGLRNLTSLQMLHMYNCPSFESLPEDHLPSSLLVLSLRECPLLEARYQSQNGKYWSKIAHIPAIKINEKVII* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02801 1239 PANTHER DISEASE RESISTANCE PROTEIN RP 42 851 IPR044974 GO:0006952
Lapu6g02801 1239 FunFam Probable disease resistance protein At1g63360 413 500 - -
Lapu6g02801 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 427 IPR027417 -
Lapu6g02801 1239 Coils Coil 41 61 - -
Lapu6g02801 1239 Gene3D - 151 324 IPR027417 -
Lapu6g02801 1239 Coils Coil 72 92 - -
Lapu6g02801 1239 SUPERFAMILY L domain-like 489 914 - -
Lapu6g02801 1239 Pfam NB-ARC domain 193 396 IPR002182 GO:0043531
Lapu6g02801 1239 SUPERFAMILY L domain-like 932 1224 - -
Lapu6g02801 1239 Gene3D Ribonuclease Inhibitor 975 1103 IPR032675 -
Lapu6g02801 1239 Gene3D - 412 500 IPR036388 -
Lapu6g02801 1239 Coils Coil 702 722 - -
Lapu6g02801 1239 PRINTS Disease resistance protein signature 616 632 - -
Lapu6g02801 1239 PRINTS Disease resistance protein signature 368 382 - -
Lapu6g02801 1239 PRINTS Disease resistance protein signature 198 213 - -
Lapu6g02801 1239 PRINTS Disease resistance protein signature 271 285 - -
Lapu6g02801 1239 Pfam Rx N-terminal domain 15 104 IPR041118 -
Lapu6g02801 1239 FunFam Probable disease resistance protein At1g61300 152 323 - -
Lapu6g02801 1239 Gene3D Ribonuclease Inhibitor 551 939 IPR032675 -
Lapu6g02801 1239 SMART LRR_typ_2 642 665 IPR003591 -
Lapu6g02801 1239 SMART LRR_typ_2 595 618 IPR003591 -
Lapu6g02801 1239 ProSiteProfiles Leucine-rich repeat profile. 597 618 IPR001611 GO:0005515
Lapu6g02801 1239 Gene3D - 331 411 IPR042197 -
Lapu6g02801 1239 Gene3D - 15 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02801 Lapu-Chr6 30250980 30255167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02801 195 839 WRKY Transcription Factor Family AT5G45050 22.126 4.27e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02801 - - gmx:100803330 2032.3