Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02790 ATGGCAGCATGCTTGAAGCCACCTAGGCTATCTAGCACTGAAGATGACTCTGTGATACTCTTTTCAACTTCTAATTCTCCAGAAGAGTCCATTAGTCCTTCTTCTTCCTCTTTCCACCATTCACCGCCACCATCACTACATCAATTCAGAACTGCGTATAAACTTTCTGTGAGAAATCTCTCCTACACTTTGCACCCTCACAAGACCACTTCCTTTTCATTTTGTCACCAGAGTAAAAAACCAGAGCCCTTAAATATACTCAACTCAATCTCTTTTGTCGCCAGAAGTTCTGAGATGGTTGTTGTCGCTGGTCCTAGTGGCACAGGAAAGTCTACCCTTCTGCGAATCATGGCAGGAAGGGTAAAAGATGAAGATTTTGATCCTAAAAGTATTTCAATCAATGATCAGCCTATGACTAGTCCAGCTCAGTTGAGGAAGATATGTGGCTTTGTGGCACAAGAGGACAATTTGCTTCCTATGCTAACTGTGAGAGAGACTTTGTTGTTTAGTGCAAAGTTTAGGCTAAAAGAAATGACACCGAAAGATAGAGAGTTGAGGGTAGAAAGCTTGTTGCAAGAGCTAGGACTTTTACATGTTGCACATAGTCTTGTTGGGGATGAAGAGAATAGAGGGATATCTGGTGGAGAGAGGAAAAGGGTATCAATTGGAGTTGACATGATTCACAATCCTCCAATTTTGCTCCTAGATGAGCCAACTTCAGGTCTGGACAGCACTTCAGCTTTGCAAGTCGTAGAGTTACTGTCATCAATTGTTAAAGCAAAGCAAAGGATAGTGGTTCTTTCGATCCACCAACCCAGCTATAGAATATTGCAGTATGTTTCCAAGTTCTTGATCCTCTCTCATGGTTCAGTTGTACACAATGGTAGCCTAGAACAACTAGAGGAAACCATAAGTAAACTGGGATTTCAAATTCCAACACAACTGAATGCTTTAGAATTCTCTATGGAAATTATACGAAGGTTGGAAGATTCCAGTTCCGAATATGACACTTGCATCATTGAGGAAAAGGAGCCATTTCCAGACCTCATGTGGCCAGAGGAAGAAAACTGTGGAGTCCAAATTGTCCAATCACAATGTACAAAGGAAAGTTTTGGCAGTCTTTGTTATGCATACTTGATAGAGATACTGTTTTTGTGCTCAAGATTTTGGAAGATCATTTATAGAACAAAACAACTTTTCTTGGCCAGAACAATGCAAGCACTAGTTGGTGGCTTTGGTCTAGGAAGTGTTTATATAAAGGTAACAAAGGATGAAGGAGGAGTTGCAGAAAGGTTAGGTCTATTTGCATTTAGTCTTAGTTTTCTCCTCTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGAGTGTTTTGATGAAAGAAGCCTCCAGGGGAGCCTATAGGATTTCCTCTTACATGATAGCCAACACTTTTGTTTTCCTTCCTTTCTTGTTTGTGGTATCCACACTTTTTGCTGTTCCAGTGTATTGGCTTGTAGGACTCAATCCTTCCCTTTCTGCCTTCACCTTCTTCACTTTTGTGGTGTGGCTCATTGTGCTCATGGCAAGTTCTCTTGTGCTCTTCTTAAGTGCAGTCTCTCCTGATTTCATTTCAGGGAACTCCCTCATCTGCACAGTTCTTGGAGCCTTCTTCCTCTTCTCAGGATACTTCATTCCAAAGGAGAGCATCCCAAAGTATTGGCTTTTCATGTACTACGTTTCCCTCTATAGATACCCTTTGGATGCGCTCCTCACAAACGAGTACTGGAATGTTAGAAATGAGTGTTTCTCACATCAAATAGAGGGATCAAAATGCTTGATCACAGGGTTTGATGTGTTGAAGAGTAGAGGACTTGAAAGGGATAACAGGTGGATTAATGTGGGAATAATGCTGGGATTCTTTGTTTTTTATCGTGTGCTTTGTTGGATAATTCTTGCAAGAAAGGCCTCCAAGACAACAATATAA 1971 0.411 MAACLKPPRLSSTEDDSVILFSTSNSPEESISPSSSSFHHSPPPSLHQFRTAYKLSVRNLSYTLHPHKTTSFSFCHQSKKPEPLNILNSISFVARSSEMVVVAGPSGTGKSTLLRIMAGRVKDEDFDPKSISINDQPMTSPAQLRKICGFVAQEDNLLPMLTVRETLLFSAKFRLKEMTPKDRELRVESLLQELGLLHVAHSLVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVVELLSSIVKAKQRIVVLSIHQPSYRILQYVSKFLILSHGSVVHNGSLEQLEETISKLGFQIPTQLNALEFSMEIIRRLEDSSSEYDTCIIEEKEPFPDLMWPEEENCGVQIVQSQCTKESFGSLCYAYLIEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKVTKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYRISSYMIANTFVFLPFLFVVSTLFAVPVYWLVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVRNECFSHQIEGSKCLITGFDVLKSRGLERDNRWINVGIMLGFFVFYRVLCWIILARKASKTTI* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02790 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 641 - -
Lapu6g02790 656 Pfam ABC-2 type transporter 382 590 IPR013525 GO:0016020|GO:0140359
Lapu6g02790 656 Pfam ABC transporter 87 240 IPR003439 GO:0005524
Lapu6g02790 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 306 IPR027417 -
Lapu6g02790 656 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524|GO:0016887
Lapu6g02790 656 SMART AAA_5 96 270 IPR003593 GO:0016887
Lapu6g02790 656 FunFam ABC transporter G family member 23 78 311 - -
Lapu6g02790 656 Pfam ABC-2 type transporter 270 334 IPR043926 GO:0140359
Lapu6g02790 656 Gene3D - 68 340 IPR027417 -
Lapu6g02790 656 MobiDBLite consensus disorder prediction 24 45 - -
Lapu6g02790 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 313 IPR003439 GO:0005524
Lapu6g02790 656 MobiDBLite consensus disorder prediction 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02790 Lapu-Chr6 30063037 30065007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02790 68 300 Calmodulin-binding Proteins AT2G36910 26.316 2.49e-12 68.6