Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02777 ATGAGAAACAATTCCCAGAACATCTATGACTTGGACTCTGCTTCATCTCAAGATCACCACACTAACTCCTCATCCCAACATCGTCAACCACCAGAAGCCACCACCACCAATCAACTTCCCACCACCCCATCTGAAAGGAGGCCACGTGGTAGGCCTGTAGGCTCAAAAAACAAGCCAAATCCTACCTCTCTCCCAGAGCACCAAACCACTGATTCCACCATGAATGTCTTCACTTTCAATGTGTCTCCAAATACGGACATCATGGAGTCTATTCTTGAGATTGCTCAGAGGGACCATGTTAGTGTCACTGTCATGAATGTTTCAGGCACTATCAACACTGTGACACTAGAACCTTCAACTGAGGGTGCATCAAACATCATGCTCCATGGACCCTTCACCTTGATCTCCCTCACTGGATCCTACTTATTCAACAACCACTACACCCTTCACCCTGGTGCCACCCCTCCTCTTCCCCCATCCTTTGGGATCCATTTCTCCTCCTCTGAAGGCCAGATTTTCAGTGGCATCGTTGGTGGTAGAGTCGTTGCTGGCGAGAATGTCATGATCACGGTCTCCACATTTAGGAACCCTGACATTTTGAAGTACACTCCCGAAGATCAAGAAGGGGACCGCCGTAACAACAATAATAACAACAGTCCTAGTGATTTCAGTGGCGGTGGTAACTCAGGGTTCAACCCAAGTGGTGGAATTCGTGGGTGGTACTATATGACAGTGTGA 738 0.481 MRNNSQNIYDLDSASSQDHHTNSSSQHRQPPEATTTNQLPTTPSERRPRGRPVGSKNKPNPTSLPEHQTTDSTMNVFTFNVSPNTDIMESILEIAQRDHVSVTVMNVSGTINTVTLEPSTEGASNIMLHGPFTLISLTGSYLFNNHYTLHPGATPPLPPSFGIHFSSSEGQIFSGIVGGRVVAGENVMITVSTFRNPDILKYTPEDQEGDRRNNNNNNSPSDFSGGGNSGFNPSGGIRGWYYMTV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02777 245 CDD DUF296 75 184 IPR005175 -
Lapu6g02777 245 MobiDBLite consensus disorder prediction 200 230 - -
Lapu6g02777 245 Gene3D - 73 210 - -
Lapu6g02777 245 ProSiteProfiles PPC domain profile profile. 71 216 IPR005175 -
Lapu6g02777 245 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 218 IPR014476 GO:0003680
Lapu6g02777 245 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 202 - -
Lapu6g02777 245 MobiDBLite consensus disorder prediction 213 230 - -
Lapu6g02777 245 MobiDBLite consensus disorder prediction 1 75 - -
Lapu6g02777 245 FunFam AT-hook motif nuclear-localized protein 17 73 210 - -
Lapu6g02777 245 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 195 IPR005175 -
Lapu6g02777 245 MobiDBLite consensus disorder prediction 1 44 - -
Lapu6g02777 245 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02777 Lapu-Chr6 29709614 29714910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02777 46 230 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.217 4.86e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02777 - - vun:114188422 326.635